Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0722 ATGGATGCACAAGCTAAGAAAAAGGCAGATTTTCGTGCTAAATTGGCCCAGAAGAAAGAAAAGCGTATAGATTCTCCCCTTGTAAGGTATAATGAATTCAATCAACCTGTTTGTCGGGTTTGTGATGTTGTTCTGAAGTCTGAATCTATATGGGATGCACACCAAATCTCCCGTAAGCATCGCGAGGCGATTGATAATCTTAAAGCTAATGCAGTTGGGTTAACTCAGCAAAACAATGCAAAGCCTGCTGTTGGTAACAGATTTCCCAAAGCCAAACCTGAACAACCTTCCGAACCACTATCCAAAAAGCCTGAACCTTCACAAGAAGTATCTAAAGCCCAGTCATCGTCTGTGCTTCCACCAAATTTTTTTGATGACAGTGCAAGGAAAACCATCTTTGTTTCATGGATATCTTGTCTTCCAAAAATGAAATCATCTGATTCAGGAAGAAATGTGGGAGTTTCTGCTCAAAGTCAGGTGTCAAAGTTGGAGGAAAGAGGTAATTTTCGTGGTCATGATGCTGCGCCGTCAAAGGTTAGTCAAGCAACAACAGAGACTAGGCAGACCTCAGCCAAAACTTCTGATGCAGAGGACAACCAAACAAAAGGATCTCTGCCTGAAGGCTTTTTTGACAATAAGGATGCGGATTTGCGGGCACGTGGCATTAAGCCTGTGAAGCCAGATCTGTGTCCGTTAATGACCTCTCTTGATTTCTTATTAGACTATAATCAGATCAATAAAGTTATAATGGCTGAGTCCATGTGCATGGTACTTAGATTGGATGAGTACAAGGAGTTTGAGAAGCTGATTCAAGAGGACTTGAAGGAGGTGGATGACCGATTGGAAGAAGAAGAGATTGATGCTGCTGAAATGATAGAAGAAGCTGAATCCGTTGAACAAAAGATCTTCAGGGAGAGAGTGGAAATGTTGAAGAAAAAGAGACTGGAGCTGAAAGCAGCAAAGTCAGCAAAGCGAGGTAAAACTTGTGAGGGTGAAACCAAGGAGGAGTCAAGGCATGAAGAAGAGTCATCCAGTGATGATGAAAGTGGTGAAAATTTTGCTGTGGACTGGAGAGCACAACACTTGTGA 1089 0.4233 MDAQAKKKADFRAKLAQKKEKRIDSPLVRYNEFNQPVCRVCDVVLKSESIWDAHQISRKHREAIDNLKANAVGLTQQNNAKPAVGNRFPKAKPEQPSEPLSKKPEPSQEVSKAQSSSVLPPNFFDDSARKTIFVSWISCLPKMKSSDSGRNVGVSAQSQVSKLEERGNFRGHDAAPSKVSQATTETRQTSAKTSDAEDNQTKGSLPEGFFDNKDADLRARGIKPVKPDLCPLMTSLDFLLDYNQINKVIMAESMCMVLRLDEYKEFEKLIQEDLKEVDDRLEEEEIDAAEMIEEAESVEQKIFRERVEMLKKKRLELKAAKSAKRGKTCEGETKEESRHEEESSSDDESGENFAVDWRAQHL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0722 362 Coils Coil 57 77 - -
Amo07g0722 362 MobiDBLite consensus disorder prediction 177 201 - -
Amo07g0722 362 Coils Coil 1 21 - -
Amo07g0722 362 MobiDBLite consensus disorder prediction 164 210 - -
Amo07g0722 362 PANTHER UNCHARACTERIZED 1 362 IPR040050 GO:0003676|GO:0005681|GO:0008270
Amo07g0722 362 MobiDBLite consensus disorder prediction 319 362 - -
Amo07g0722 362 MobiDBLite consensus disorder prediction 101 121 - -
Amo07g0722 362 Pfam Zinc-finger of C2H2 type 38 60 - -
Amo07g0722 362 SUPERFAMILY beta-beta-alpha zinc fingers 30 71 IPR036236 -
Amo07g0722 362 MobiDBLite consensus disorder prediction 319 345 - -
Amo07g0722 362 MobiDBLite consensus disorder prediction 73 121 - -
Amo07g0722 362 Gene3D Classic Zinc Finger 31 69 - -
Amo07g0722 362 Coils Coil 267 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0722 Amo-Chr7 9518512 9521690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0722 1 362 C2H2 Transcription Factor Family AT3G02860 47.541 3.08e-84 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0722 K13104 - gmx:100808515 389.037