Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0701 ATGGGTCTCTCAGGGAACCTTCCATTGGGTTTGGGTAACCTCACTGAGCTTCAGACCCTCTCTCTCCGATTCAATGCACTCACGGGTCCCATTCCCTCCGATTTCGCCAAACTCACCTCTCTCAGAAACCTCTACCTTCAGGGGAACTTCTTCAATGGCCAAATCCCTGATTTCTTGTTCTCTATGGAGAATTTGGTTAGGTTGAATTTGGGGAAGAACAATTTCAGCGGCGAGATCTCTCCCAAGTTCAATTCTCTTACTCGTTTGGATACTCTCTATTTAGAGAATAATCACTTCACTGGGAGCATCCCTGACCTTAGTGTTCCACCTCTGCATCAGTTCAACGTGTCGAATAATCGGTTGAACGGTTCGGTTCCGGAGCGGTTTTCGGGGTTGAATGAAAGCGCTTTTTCCGGGAATGAGCTCTGTGGGAAGCCCCTTGAAGCTTGCCCTGGTAGTAACAATGGTGGAGGAGGGAGCCATAAGAAGAAGAATAAGCTCTCTGGCGGTGCGATTGCGGGTATTGTTATTGGGTCTGTAATTGGAGCGATTTTGATTCTACTGCTTTTGTTCTTGTTATGCAGAAAATCCAGAAAAACTGATTCCAGGGATGTTTCTGCGGCTGCACCTCCAAAAAGTGTGGAGGTTGCTGACGTGGCACGAGATGGTGGTGGTGCTAGTGGTTCTTCGGCCGTTGCGGGTTCAAAGGTTGAAAGCAAGAGCAATGGTGGTGGTGCAAAAAGTTTAGTATTCTTTGGTGATGTGAATAGGCCGTTTGATCTTGAAGAGTTGCTGAGGGCTTCTGCTGAGGTTCTTGGAAAAGGGACATTCGGAACCACCTATAAGGCCACGATGGATTTGGGGATCAGCGTCGCCGTGAAGCGCCTGAAGGATGTTACCCTGCCGGAGAGGGAGTTCAGGGAGAAGATAGAGCAAGTTGGGAAGATGGTTCATGAGAATTTGGTTCCACTCAGGGGTTACTACTTCAGCAAAGATGAGAAGCTTGTTGTGTATGATTACATGCCAATGGGAAGCTTGTCTGCATTATTACATGCGAATAATGGCGCCGGCAGGACTCCCCTGAATTGGGAAACAAGGTCTGCCATTGCCCTTGGCGCTGCTCGTGGGGTCGCATACCTACATTCACAAGGACCAACATCCTCCCATGGAAACATCAAATCCTCAAATATCCTTCTCACCAAATCATTTGAAGCTCGTGTCTCCGACTTTGGCCTTGCTCATCTTGCTCTCCCGACCGCCACACCCAACCGTATTTCCGGCTATCGAGCCCCAGAGGTCACTGACTCTCGCAAAGTATCACAAAAGGCAGACGTCTACAGCTTTGGTATAATGCTCTTGGAACTCCTAACGGGGAAGGCTCCCACTCATTCCTCACTGAATGAAGATGGTGTAGACCTCCCAAGATGGGTCCAGTCGGTGGTTCAAGACGAGTGGAACACTGAGGTTTTCGACGTGGAGCTCCTTAGGTACCAGAACATTGAGGATGAAATGGTGAAGCTCTTGCAGCTCGCGCTCGAATGCACAGCTCAATACCCCGACAAGAGACCTTCAATGGAGGTGGTTGAAAGCAGGATTCAGGAAATTTCACGTTCTAGTTTAGAGAAAGAGGAAGAAGAAGAAAAAAATGAATTTTCACAACAGTACTACTCTGTTGATTCTGGTCCCCCACAAGCTTGA 1698 0.4841 MGLSGNLPLGLGNLTELQTLSLRFNALTGPIPSDFAKLTSLRNLYLQGNFFNGQIPDFLFSMENLVRLNLGKNNFSGEISPKFNSLTRLDTLYLENNHFTGSIPDLSVPPLHQFNVSNNRLNGSVPERFSGLNESAFSGNELCGKPLEACPGSNNGGGGSHKKKNKLSGGAIAGIVIGSVIGAILILLLLFLLCRKSRKTDSRDVSAAAPPKSVEVADVARDGGGASGSSAVAGSKVESKSNGGGAKSLVFFGDVNRPFDLEELLRASAEVLGKGTFGTTYKATMDLGISVAVKRLKDVTLPEREFREKIEQVGKMVHENLVPLRGYYFSKDEKLVVYDYMPMGSLSALLHANNGAGRTPLNWETRSAIALGAARGVAYLHSQGPTSSHGNIKSSNILLTKSFEARVSDFGLAHLALPTATPNRISGYRAPEVTDSRKVSQKADVYSFGIMLLELLTGKAPTHSSLNEDGVDLPRWVQSVVQDEWNTEVFDVELLRYQNIEDEMVKLLQLALECTAQYPDKRPSMEVVESRIQEISRSSLEKEEEEEKNEFSQQYYSVDSGPPQA* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0701 565 Gene3D Ribonuclease Inhibitor 1 156 IPR032675 -
Amo07g0701 565 Gene3D Phosphorylase Kinase; domain 1 232 340 - -
Amo07g0701 565 MobiDBLite consensus disorder prediction 535 565 - -
Amo07g0701 565 SUPERFAMILY L domain-like 2 133 - -
Amo07g0701 565 MobiDBLite consensus disorder prediction 535 552 - -
Amo07g0701 565 MobiDBLite consensus disorder prediction 219 243 - -
Amo07g0701 565 Gene3D Transferase(Phosphotransferase) domain 1 341 560 - -
Amo07g0701 565 CDD STKc_IRAK 272 535 - -
Amo07g0701 565 ProSiteProfiles Protein kinase domain profile. 266 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0701 565 PANTHER OS05G0588300 PROTEIN 3 546 - -
Amo07g0701 565 Pfam Protein tyrosine and serine/threonine kinase 270 530 IPR001245 GO:0004672|GO:0006468
Amo07g0701 565 SUPERFAMILY Protein kinase-like (PK-like) 270 529 IPR011009 -
Amo07g0701 565 ProSitePatterns Protein kinases ATP-binding region signature. 272 294 IPR017441 GO:0005524
Amo07g0701 565 PANTHER INACTIVE RECEPTOR KINASE-RELATED 3 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0701 Amo-Chr7 9258841 9262085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0701 1 535 Receptor kinase-like Gene Family AT1G48480 58.407 0.0 631
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo07g0701 PK_Tyr_Ser-Thr 1.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0701 - - aprc:113846223 778.089