Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0692 ATGTCAGGTATATTTACGGACACTGAGATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGAATGAATTCGAACAAGATTTCAGAGATGAATTTACTGAGGGAGCGTTTATTTCTGAATCTGATCAGTCAGAAGATATCCTTGAAGTCGCTTATGTGGTTGACTCCGTGCAAGACATTACAACTTTGAAATTTAGTGAGAATTTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTCCAGCTTGCATTTGATTTTTATATGAAGTACTCAAAGTCGAAGGACTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTACTGGCGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATAGAAAAAAGGAAGAAGGAGCCTAGATTGGAAACAAGAACTGGATTTGTGGGAAGGTATGTGGGGTCGCGGTATGATTTGACAAGTTTTGCAGAGCATTTTCAAAGGTGTGTTGCACACATGCGCTTTAAAGAATTTAATACTTATTATGAATCTACACGTGGGGTGCCCGTCATGCAAACATGTATAGAGCTGCTAGAGAGATATGCTGCTGAGTTATACACTCATGTGATATTTCTTTTCTTTCGGCCATTTCTCTCTAGAGCTGGATCAATGCGGGTGCTAAACATAGATAATACCGATGATTGCATAAAGTACATTGTGTGTAAGCATGGGAGGCCCAATTTTATGTGGACCGTTGATTTTCGTCAAGAAGAAATGATCTTCATGTGTACCTGTTTAAGAATGGAGTCATTTGGAATTCCCTGTGAACATATTGTGAAAGTTCTGGTTGACAGAGACATCAGTGAGATTCCCCGGTCATTGGTATTGGATAGATGGACAAAAAAGGTTAAATCAGCACTCAATGATCCAAGTGGGCTCACCAGGGATGCTGTTGTTATTAGTCGTCAAAGTGCCTTGGTGGAATTTTCTAAACAATTGGCTGTTGTTGCTGCTAAAGTACCAGAGAGATATGAAGAGACACGTGACCTAATTATGGGATTGTACTCATCTTACAAGGCTGCAGATGAAGGCACTAATCAACCTCAGTCAGGTGTAGCTAAAAGTAGCAATCCGTATGTGCATCAAAGCGGAGTAGGCTCAGGACAACTATCTAGGAAGAAGCGGCAACGTTGTAGTGTTTGTCAAATGGAAGGAAATAAGAAGACAACATGTCCCTGGCAAAAGGACATTGACAACAACGTTATTGAAGATGAAGCTAATGGTTCGGATGACGGCGACGTATATCCAGAACTGACGGCTGAGTTAGATAGTGATAATTAG 1383 0.4035 MSGIFTDTEMNEQYQEDDDFNQQEELVSDQDMMDEQNEFEQDFRDEFTEGAFISESDQSEDILEVAYVVDSVQDITTLKFSENFAEEIGKYHFSTFQLAFDFYMKYSKSKDFSARKSKTFKNSTGEIYKQKFVCHRQGFRMEKYYTIEKRKKEPRLETRTGFVGRYVGSRYDLTSFAEHFQRCVAHMRFKEFNTYYESTRGVPVMQTCIELLERYAAELYTHVIFLFFRPFLSRAGSMRVLNIDNTDDCIKYIVCKHGRPNFMWTVDFRQEEMIFMCTCLRMESFGIPCEHIVKVLVDRDISEIPRSLVLDRWTKKVKSALNDPSGLTRDAVVISRQSALVEFSKQLAVVAAKVPERYEETRDLIMGLYSSYKAADEGTNQPQSGVAKSSNPYVHQSGVGSGQLSRKKRQRCSVCQMEGNKKTTCPWQKDIDNNVIEDEANGSDDGDVYPELTAELDSDN* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0692 460 PANTHER OS01G0607050 PROTEIN 166 363 - -
Amo07g0692 460 Pfam FAR1 DNA-binding domain 101 161 IPR004330 -
Amo07g0692 460 MobiDBLite consensus disorder prediction 437 460 - -
Amo07g0692 460 MobiDBLite consensus disorder prediction 379 405 - -
Amo07g0692 460 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 166 363 IPR031052 GO:0006355
Amo07g0692 460 Pfam SWIM zinc finger 277 296 IPR007527 GO:0008270
Amo07g0692 460 MobiDBLite consensus disorder prediction 1 23 - -
Amo07g0692 460 SMART 26again6 275 302 IPR006564 GO:0008270
Amo07g0692 460 ProSiteProfiles Zinc finger SWIM-type profile. 262 300 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0692 Amo-Chr7 9035448 9037802 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo07g0692 FAR1 1.5e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0692 - - adu:107458210 543.502