Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0665 ATGGCTGGTATTCACAAAATTGCTGACATCAATCCTACAATCGACAATTTGTGTGTACGTATACGAGTGATACGGTTATGGACACTACCAAGTTACGGAAATTCTCCATTGCCATACTCAATTGAGATGGTTTGGCTCGATGAAGACGGAGAAAAAATACACGCCTCAGTTAAGAAGGCTTTTGTGTCTCGATTCGTGAATTTGCTGGAGGAAGGAATATCTTACCAAATAAGATATTTTGGTGTTGGACTCAATAAGGGTTACTTCAAGACTACACATCATGAATACGTGGTTAATTTAAACCAACGTACTGATGTGCACAGACTTCCAGAATCGTCGAGTATCCCACGATATGGATTTAATTTTGTGAGTTTTGACACTCTCAATGCTCCTGGGTATGATTGCACCTATTTAGTTGATGTTGTTGGATATCTTGCTGGAATTGGGAATGAGAAGACTCTTAAAAAGGATGGCAAATCTACCAAATATACTGTTATCGAATTAGAGATTGATGATGGAAAAATAATGGAGTGTGCACTTTTTGGCAACTATGCACATGAATTAAATGCTTTTCTGGGATCTGGCAATAAGGATGAAGCTGTTGTCGTCTTACAGTTTGTTAGAGTGAAGTTATTTAACGAAAAGATTGTTTTACAAAATTCCATGTATGGCACAAAGATGTTCTTCAATCTTGAAGATACAACTGTCATCCAATTTAAAAATAGCTTTGTAAGATTTGAAGAATCTAGAGGTAACATCGGCGGAATTCCAAATGAGGCTGCATTCTTAAAAATTTATCAAGGCAAAACCATCGAGCAGTTAAAAGAATTCGAAACGAATTTGTTGCTTGAATTCTCCAATGAAGTTGCTGCCAATGATGAATCCGAATTGTTGGAAAAAAATGCTATTACACCAACTAAGCGATTATGCTCGGAGTCGGAAGAATCGAAGGTAGAAGGTGATACCTCAACTTCCAAGAATATCAAGATTGAGAAAGAAACTTGA 1005 0.3701 MAGIHKIADINPTIDNLCVRIRVIRLWTLPSYGNSPLPYSIEMVWLDEDGEKIHASVKKAFVSRFVNLLEEGISYQIRYFGVGLNKGYFKTTHHEYVVNLNQRTDVHRLPESSSIPRYGFNFVSFDTLNAPGYDCTYLVDVVGYLAGIGNEKTLKKDGKSTKYTVIELEIDDGKIMECALFGNYAHELNAFLGSGNKDEAVVVLQFVRVKLFNEKIVLQNSMYGTKMFFNLEDTTVIQFKNSFVRFEESRGNIGGIPNEAAFLKIYQGKTIEQLKEFETNLLLEFSNEVAANDESELLEKNAITPTKRLCSESEESKVEGDTSTSKNIKIEKET* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0665 334 Gene3D - 114 249 IPR012340 -
Amo07g0665 334 CDD RPA1_DBD_B_like 140 243 - -
Amo07g0665 334 MobiDBLite consensus disorder prediction 310 334 - -
Amo07g0665 334 PANTHER ANIMAL RPA1 DOMAIN PROTEIN 18 279 - -
Amo07g0665 334 SUPERFAMILY Nucleic acid-binding proteins 2 114 IPR012340 -
Amo07g0665 334 Pfam Domain of unknown function DUF223 43 127 IPR003871 -
Amo07g0665 334 SUPERFAMILY Nucleic acid-binding proteins 120 243 IPR012340 -
Amo07g0665 334 PANTHER REPLICATION FACTOR A 1, RFA1 18 279 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Amo07g0665 334 MobiDBLite consensus disorder prediction 308 334 - -
Amo07g0665 334 Gene3D - 3 111 IPR012340 -
Amo07g0665 334 CDD RPA1_DBD_A_like 18 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0665 Amo-Chr7 8654076 8659797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0665 4 212 Core DNA Replication Machinery Family AT5G08020 23.182 3.23e-10 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0665 - - adu:107472352 519.62