Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo07g0657 | ATGACAGGGTTTGGATCTTCATGTGGAGCATGCAAGTTCCTAAGGAGAAAGTGTGGTAGTGGTTGTGTTTTTGCTCCTTACTTCTCTTATGACCAAGCAGCAACACATTTTGCAGCGGTTCATAAGATCTATGGTGCTAGTAATGTGTCAAGGCTATTGTCACATCTTCCAATCCTTAATAGAAGTGATGCTGCCATCACTATCACTTATGAAGCTCTTGCTCGCATGCAAGATCCTATTTATGGTTGTGTTGCAAGTTTGCAAGAGGAGATAGATATTATTGGGAGTCTAATGACAAATTCTACAATTGGTGCTACCAATTGTGGCATAAATAATGTTGAAGCACCAATAACAAAAATGGAGTACTCGAACTGTGGAATACAATACCCTATGCAAGATGATGATGATCATCAATGTTACCAAAATGAAATGGCCAATAATATTCTTTCTCAAGAAGGAAGTGTGACACCCCGCCAAGGCTATGGCTCACACATGGATATAGAGCTTCCAAATAATGATGGAAATGGGTTTGAAGGGCCAATTGTATTTTATGACCATCCCAACTTCAATAATAATAATCCATTAGAGAAGTTCCTATCTGGAATTGATCAAGAGGGATTCATGAACCACCCGTGA | 636 | 0.3931 | MTGFGSSCGACKFLRRKCGSGCVFAPYFSYDQAATHFAAVHKIYGASNVSRLLSHLPILNRSDAAITITYEALARMQDPIYGCVASLQEEIDIIGSLMTNSTIGATNCGINNVEAPITKMEYSNCGIQYPMQDDDDHQCYQNEMANNILSQEGSVTPRQGYGSHMDIELPNNDGNGFEGPIVFYDHPNFNNNNPLEKFLSGIDQEGFMNHP* | 212 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo07g0657 | 211 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 33 | 1 | 181 | - | - | |
Amo07g0657 | 211 | ProSiteProfiles | LOB domain profile. | 6 | 108 | IPR004883 | - | |
Amo07g0657 | 211 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 1 | 181 | - | - | |
Amo07g0657 | 211 | Pfam | Lateral organ boundaries (LOB) domain | 7 | 89 | IPR004883 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo07g0657 | Amo-Chr7 | 8445990 | 8448541 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo07g0657 | 1 | 140 | AS2 family | AT5G06080 | 50.327 | 4.62e-47 | 151 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | LOB | Amo07g0657 | LOB | 4.4e-29 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo07g0657 | K13945 | - | gmx:100809636 | 224.172 |