Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0657 ATGACAGGGTTTGGATCTTCATGTGGAGCATGCAAGTTCCTAAGGAGAAAGTGTGGTAGTGGTTGTGTTTTTGCTCCTTACTTCTCTTATGACCAAGCAGCAACACATTTTGCAGCGGTTCATAAGATCTATGGTGCTAGTAATGTGTCAAGGCTATTGTCACATCTTCCAATCCTTAATAGAAGTGATGCTGCCATCACTATCACTTATGAAGCTCTTGCTCGCATGCAAGATCCTATTTATGGTTGTGTTGCAAGTTTGCAAGAGGAGATAGATATTATTGGGAGTCTAATGACAAATTCTACAATTGGTGCTACCAATTGTGGCATAAATAATGTTGAAGCACCAATAACAAAAATGGAGTACTCGAACTGTGGAATACAATACCCTATGCAAGATGATGATGATCATCAATGTTACCAAAATGAAATGGCCAATAATATTCTTTCTCAAGAAGGAAGTGTGACACCCCGCCAAGGCTATGGCTCACACATGGATATAGAGCTTCCAAATAATGATGGAAATGGGTTTGAAGGGCCAATTGTATTTTATGACCATCCCAACTTCAATAATAATAATCCATTAGAGAAGTTCCTATCTGGAATTGATCAAGAGGGATTCATGAACCACCCGTGA 636 0.3931 MTGFGSSCGACKFLRRKCGSGCVFAPYFSYDQAATHFAAVHKIYGASNVSRLLSHLPILNRSDAAITITYEALARMQDPIYGCVASLQEEIDIIGSLMTNSTIGATNCGINNVEAPITKMEYSNCGIQYPMQDDDDHQCYQNEMANNILSQEGSVTPRQGYGSHMDIELPNNDGNGFEGPIVFYDHPNFNNNNPLEKFLSGIDQEGFMNHP* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0657 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 33 1 181 - -
Amo07g0657 211 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Amo07g0657 211 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 181 - -
Amo07g0657 211 Pfam Lateral organ boundaries (LOB) domain 7 89 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0657 Amo-Chr7 8445990 8448541 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0657 1 140 AS2 family AT5G06080 50.327 4.62e-47 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo07g0657 LOB 4.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0657 K13945 - gmx:100809636 224.172