Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0646 ATGGCGAATGGTATCACGCAAGAGCCTTCTTCTTCCATGCTCGTCGGCCGGTTTAACGCCCTACTTTCACAGCGCCAAGGCTACCTCAAGGTTTTCTCTGCCGAAGAAATTGTTCGGACGTATGGGCTCTTGTTGTCAGAACTTTACTCCAATGTGAACCCCTTCATTACCGATCTCACTATCATTGCCGGCCAACAAAGGAAACACGCCAAGGGCATCGCCGATGCCATTTGCAACTGGATTCTTGAATTCTGTCTCCATTGCTGCGGAAATTACCCATAA 282 0.4894 MANGITQEPSSSMLVGRFNALLSQRQGYLKVFSAEEIVRTYGLLLSELYSNVNPFITDLTIIAGQQRKHAKGIADAICNWILEFCLHCCGNYP* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0646 93 PANTHER PRE-MRNA CLEAVAGE COMPLEX II 9 84 IPR045154 GO:0000993|GO:0003729|GO:0006369|GO:0006378|GO:0006379
Amo07g0646 93 SUPERFAMILY ENTH/VHS domain 34 84 IPR008942 -
Amo07g0646 93 PANTHER POLYADENYLATION AND CLEAVAGE FACTOR HOMOLOG 4 9 84 - -
Amo07g0646 93 Gene3D - 29 86 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0646 Amo-Chr7 8160945 8161318 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0646 14 83 C2H2 Transcription Factor Family AT4G04885 53.947 2.16e-17 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0646 K14400 - adu:107488587 120.938