Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0625 ATGGCAATTGGGTTCATGGAGGTGCAGCTTCTCAAAGCAAATGACCTCAAAGTCACTGATTTTTTGGGCAAAATAGATCCATATGTTGTGATACAATACAAAGGGCAAGAGCAAAGGAGCACAGTTGCTAATGGGCAAGGAAGAAATCCAACGTGGAATGAGAAATTTATGTTCAGAGCAGAGTACCCAACTGGATCTGGAGATCAATACAAGCTCATTCTCAAAATCATGGACAAGGACACTTTTTCTAAGGATGATTCTCTTGGCCAAGCCATAATCTATGTTAAAGATTTATTGGCCCAAGGGATAGAGAATGGAGGTGCTAAGCTACAAGCTCTCAAGTATAGAGTAATTGATGAAAACAACTCATATTGTGGTGAAGTTGATGTTGCCATAACTTTTACCCCAAAGGTGGAAGAGAAATTTATTGGTGAAGATATTGGAGGATGGAAAGAAAGTTGCTACTAG 468 0.3953 MAIGFMEVQLLKANDLKVTDFLGKIDPYVVIQYKGQEQRSTVANGQGRNPTWNEKFMFRAEYPTGSGDQYKLILKIMDKDTFSKDDSLGQAIIYVKDLLAQGIENGGAKLQALKYRVIDENNSYCGEVDVAITFTPKVEEKFIGEDIGGWKESCY* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0625 155 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Amo07g0625 155 PANTHER ELICITOR-RESPONSIVE PROTEIN 1 1 154 - -
Amo07g0625 155 Gene3D C2 domain 2 137 IPR035892 -
Amo07g0625 155 PANTHER C2 DOMAIN-CONTAINING 1 154 - -
Amo07g0625 155 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 139 IPR035892 -
Amo07g0625 155 SMART C2_3c 5 107 IPR000008 -
Amo07g0625 155 Pfam C2 domain 6 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0625 Amo-Chr7 7796343 7798677 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0625 3 110 C2H2 Transcription Factor Family AT4G21160 32.407 1.19e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0625 - - gmx:100791344 228.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0470 17 9163005 9165063 Amo07g0625 07 7796343 7798677 hybridization