Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0611 ATGACTTCAACAAATTTACCTTCAGGTGCAAGCAAGAAGTTCAAACCTACAGATGAAGAACTCATTCAAGATTTTCTCCGTAACAAAATCAATGGGAGGCCTCTACCAAACTATGGAACCATTCTTGAAGAAAACGTTGAAAATTCTTATGATGGGAAGGACCTCTATTTCTTTACTACTCTGAAGAGGAAGTTCTCGACTAACAGCTTGAGGATGGTTCGCACCATCGGGTTGGGTTCTTGGGAAGGTGAAGACATCGGAAAAGAGATTATGGCCAACAAAACTAACCAGCGCATTGGAATGAGGAAACGATATCGCTTTGAGAAGAGTGGTACTAGCCATGATGGTGGATGGATCTTGCATCAATATAGCATTGATTCTTCTTTGTTACCAAATCCTTCCAATGTAAGTATCATAATTTTGTGTATATTCTTTAACCAGTGTAACAGCCCTAGGAATCCAAGACAAAGCAAAAACTATAATTGA 486 0.3909 MTSTNLPSGASKKFKPTDEELIQDFLRNKINGRPLPNYGTILEENVENSYDGKDLYFFTTLKRKFSTNSLRMVRTIGLGSWEGEDIGKEIMANKTNQRIGMRKRYRFEKSGTSHDGGWILHQYSIDSSLLPNPSNVSIIILCIFFNQCNSPRNPRQSKNYN* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0611 161 ProSiteProfiles NAC domain profile. 8 147 IPR003441 GO:0003677|GO:0006355
Amo07g0611 161 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 13 142 - -
Amo07g0611 161 Pfam No apical meristem (NAM) protein 13 125 IPR003441 GO:0003677|GO:0006355
Amo07g0611 161 SUPERFAMILY NAC domain 12 131 IPR036093 GO:0003677|GO:0006355
Amo07g0611 161 Gene3D NAC domain 17 150 IPR036093 GO:0003677|GO:0006355
Amo07g0611 161 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 13 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0611 Amo-Chr7 7511649 7512179 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0611 6 145 NAC Transcription Factor Family AT5G13180 32.667 1.01e-14 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Amo07g0611 NAM 1.1e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0611 - - aip:107606630 315.849