Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0607 ATGTGGAATCACCTTCTACACAAAGAAAGATCGTGGAGTCCTCCCAAATCACTTGTCTTAACCAGCAGCAGCCTTTCCTCATTAGTGAATTGTACTCAATTGCAAATACTGGCCATTCATGAAAATTATTTAGGTGGTGTATTGACAGAACTCATAGGCAACTTATCAAGCAATCTCGTTCAGCTTGCTATAGGGTTCAATCAAATATCAGGAAGGATACCTGAAGGAATTGGAAAACTAATCAACCTAGATGGACTTGGTATGGAGAGAAATTTTCTTGAGGGAACAATTCCATTTTCAATTGGAAAGCTAAAGAATCTGGTAAAGTTGACCTTGGGGGAAAATAAGTTGTTTGGCAACATTCCTCTTGTCATTGGTAACCTTACTATGTTGTCTGAACTTGATTTGAGCTTAAATAAATTTGAAGGATTCGTTCCTTTTACCCTTGGAAACTGCACCAAGATGGAGATATTTTCTGCCCATGATAACAACTTAAGTGGTAATATACCCATTCAAACTTTTGGCCACCAACAAGGTTTAATAGCGTTGTCCCTATACTCCAACTCCTTTACTGGCTCTATTCCTTCTGATCTTGGTAATTTGAACCATCTTTCCTTCTTGTATTTACAAGAAAACAAGCTGAGTGGTGACATTCCCATGGGACTTGGTGCTTGTTCTGCTTTAACAGATCTTGTACTAAAAAGAAACTCGTTCCATGGAAGTATACCTTCATTTTTGGGATCTCTACTATCCCTTGAATTCTTAGACCTTTCTAATAGCAACTTCTCAAGCATAATCCCTCATGAACTTGTGAATCTCAAATTTCTGAGTCTGTTGAACTTATCTTTCAACCATCTCTCTGGTGAAGTCCCGGTAGGAGGAGTATTTAATAATGTCACAGCAATATCACTCGTTGGAAATAAAGATCTTTGCGGTGGGATACCTCAATTGAATATTCCTGCATGTCCTATGTTGCCTTTACAGAAGAAACACAAGAGATCACTTAAAAAGAGAGTCATCCTCGTCATTGCATTTGGAGGAATTCTAATCTCTTGTGTAACTTTTATTAGTATATATCTTGTCAAGAAAAAGGCAAAAAAGTTAGCCACTACTTCTCTAGCTTTGCAATATTGTTATGTGAAGGTTTCCTATGGAGAGTTACATCAAGCTCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTTGGGGCAGGAAGATTTGGGACTGTGTATAGAGGAATCCTCATCCATTTTGAGAGACCTGTTGCTGTAAAAGTGTTGAAACTCCAAACACGCGGGGCATCGAAGAGTTTCATGGCCGAATGCAAAGCTCTAGGAAAAATCAAGCACAGAAACCTTGTCAACATATTGACTTGTTGTTCAAGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTTTAGAAAGCTTGTTGCACAACACCATTGAAGATAGTGAGTCCACAAATCAGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTTAGAAGAAGCTGTAGTTCATTGTGATATAAAGCCAAGCAATGTTGTACTTGATGATGAAGTTGTTGCTCACTTAGGAGACTTTGGATTAGCTAGGCTCGTTCATGGCGCCACAAGCTTCTCTAGCAAATATGGAGCAAGTGGCTTAGTGTCACCAGAAGGAGACATGTATGGCTATGGAATTCTTCTTTTAGAGATGATCACTGGAAAGAAGCCAACTGATAGCATGTTTGGTGAAGATCTAAGCCTACACAAGTTCTGTAACATGGCAACTCTAGATGGAATCATTGAGATTGTTGATTCAAGATTGCTCATTCCAATTGATCATCAAGAAAGAAGAAGGGTCACACAACAGCAAAATTTGGAAGACACCATTCGAGAATGTCTTGTGTCGTTTGCTAGGATTGGAGTTGCATGCTCCCAAGAGTTTCCTAATCAGCGAATGACTATAAAAAATGTCATAACTGAGTTGCATGCAATTAAGCAAAAGCTATCCTGCTAA 2070 0.387 MWNHLLHKERSWSPPKSLVLTSSSLSSLVNCTQLQILAIHENYLGGVLTELIGNLSSNLVQLAIGFNQISGRIPEGIGKLINLDGLGMERNFLEGTIPFSIGKLKNLVKLTLGENKLFGNIPLVIGNLTMLSELDLSLNKFEGFVPFTLGNCTKMEIFSAHDNNLSGNIPIQTFGHQQGLIALSLYSNSFTGSIPSDLGNLNHLSFLYLQENKLSGDIPMGLGACSALTDLVLKRNSFHGSIPSFLGSLLSLEFLDLSNSNFSSIIPHELVNLKFLSLLNLSFNHLSGEVPVGGVFNNVTAISLVGNKDLCGGIPQLNIPACPMLPLQKKHKRSLKKRVILVIAFGGILISCVTFISIYLVKKKAKKLATTSLALQYCYVKVSYGELHQAQATNGFSSSNLVGAGRFGTVYRGILIHFERPVAVKVLKLQTRGASKSFMAECKALGKIKHRNLVNILTCCSSVDYKGDDFKAIVFEFMPNGSLESLLHNTIEDSESTNQSLNLMQRVNIALDVAFALDYLHNDLEEAVVHCDIKPSNVVLDDEVVAHLGDFGLARLVHGATSFSSKYGASGLVSPEGDMYGYGILLLEMITGKKPTDSMFGEDLSLHKFCNMATLDGIIEIVDSRLLIPIDHQERRRVTQQQNLEDTIRECLVSFARIGVACSQEFPNQRMTIKNVITELHAIKQKLSC* 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0607 689 PANTHER LRR RECEPTOR-LIKE KINASE 25 689 - -
Amo07g0607 689 Gene3D Phosphorylase Kinase; domain 1 355 477 - -
Amo07g0607 689 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 25 689 - -
Amo07g0607 689 Gene3D Transferase(Phosphotransferase) domain 1 478 688 - -
Amo07g0607 689 Gene3D Ribonuclease Inhibitor 10 322 IPR032675 -
Amo07g0607 689 Coils Coil 630 650 - -
Amo07g0607 689 ProSiteProfiles Protein kinase domain profile. 396 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0607 689 SMART serkin_6 396 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0607 689 Pfam Protein kinase domain 398 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0607 689 SUPERFAMILY Protein kinase-like (PK-like) 382 680 IPR011009 -
Amo07g0607 689 ProSitePatterns Protein kinases ATP-binding region signature. 402 425 IPR017441 GO:0005524
Amo07g0607 689 SUPERFAMILY L domain-like 57 312 - -
Amo07g0607 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 528 540 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0607 Amo-Chr7 7466712 7474911 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0607 25 687 Receptor kinase-like Gene Family AT3G47570 45.072 8.62e-180 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo07g0607 Pkinase 3.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0607 - - ahf:112766919 987.252