Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0604 ATGCTCATATTGTCACCGTCACACTACAACGAAATAATGATGGTGTCTCTCATCATGTTTCTCCTATCTGTGGCTTCACAAACCTTGGCTGTGAATGCGGCCTTGAGTTCAGAGACCGATAAAATTGCTTTGCTTGCTTTGAAGGACAAGCTTACCAATGGCGATCCTCATGCTTTGCCATCATGGAATCAGTCTCTCCATTTCTGTGCATGGGAGGGTATTACATGCAGTCGTCGCCACATGAGAGTCTCAGCCTTACAACTTCAAAATCAAGACTGGGGTGGTACTCTTGCACCATCCTTGGGAAATCTGACGTTCCTAAGGCTGATCAATCTTACTAACATCAACTTGCATGGTGAGATTCCAAGAGAAGTTGGTTATTTAAAGAGGCTGCAGATTCTTGACTTGGGGCACAATAATCTTCATGGTCATATTCCTATGCAGATGATAAATTGTTCAAGCCTTCAAGTATTTCTATTGCGGTTCAATAATCTAACTGGCAAAATTCCTTCATGGTTTGGTTCTATGATGCAACTCACTCAGCTGGCGCTTGCAGTCAACAATTTTGTTGGTAGTATCCCACCTTCATTGGGAAATCTCTCATCTCTTGAGAAGTTGTCACTTTCATACAATCATTTGGAAGGAAGCATAACTCCAACTTTGGGTAGGTTGTCAACTTTGAAATTTTTGGGTTTGGGTGTAAATAATTTTTCTGGTCAAGTCCCTCCTTCACTTTACAACCTTTCAAATATTCAACTTCTTGAATTTGTGGACAACCAGTTAGTGGGCACTCTTCTCTCAAATTTACCTATGGCTTTTCCCAATCTTGAGCTACTTGTGTGTGGAGGGAACCGATTCACCGGTACTTTTCCATCTTCAATATCCAACCTTTCTGAACTGCAACAATTTGATATCTCAGAAAATGATTTTCATGGACCAATTTCTCCTACCATAGGAAGTTTACGCAAACTCCAGATATTTAATGTTGGACAGAATAGATTCGGAAATGGAAGAGCTCATGATTTGGATTTCCTTTTCTCATTGACTAATTGTACTCAATTGCAGAAACTAGCCTTTTATAACAATAATTTAGGTGGAGTATTGCCAGATATCATAGGCAACTTATCAACCAATCTCGTTTTGCTTGATATGGCGTTGAATCAAATATCTGGAAGGATATCAGAAGAAATTGGAAAACTAATCAACCTAAGAACACTTGGTATGGATGAAAATTCCTTTGAGGGAACAATTCCAGATTCAATGGGAAAGCTAAAAAATCTGGGAGCGTTGTGGTTGCGTGGAAATAAGTTCTATGGCAACATCCCTCTTGTCATTGGTAACCTTACTATGTTGTCTGATGTTCATCTCGACTCAAATAAATTTGAAGGATTCATTCCTTTTACACTTGGAAACTGCACCAAGATGGAGAAATTTTATGCTCATGAAAATAACTTAAGAGGTGATATACCCTATCAAACATTCGGCTATCAACAAGGTTTAGTAGAGCTGTCCCTATACTCCAACTCCTTTACTGGCCACATTCCTTCTGAGTTTGGTAACTTGATCCATCTTTCCCTCTTGTATTTGCAAGAAAACATGTTGATTGGTGAGATTCCCATGGAACTTAGTGCTTGCTCTGCTTTAACAGTGCTCGTACTAGAAAGAAACTCGTTCCATGGAAGTGTACCTTCATTCTTGGGATCTCTACTATCCCTTGAAGTCTTGGACCTTTCTAGTAACAATTTTTCAAGCACAATCCCGCATCAACTTGTGAATCTCACGTTGCTCAAGACTTTGAACTTATCTTTCAACCATCTCTATGGTGAAGTCCCGGTAGGAGGAGTATTTAATAATGTCACAGCAATATCACTCGTTGGAAATAAAAATCTTTGCGGTGGGGTACCTCAATTGAATCTTTCTGCATGCCCTATGTTGCCCTCACAGAAGAAACACAAGATATCACTTAAAAAGAGAGTCGTCCTCGTCATTGCATTTGGAGGAATTCTAATCTCTTGTGTGGCTTTTATAAGTATATATCTTGTCAAGAAAAAGGCAAAAAAGTTAGCCACTACTTCTCTAGCTTTGCAATATGCTTATGTGAAGGTTTCCTATGGAGAGTTACATCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAAGATTTGGGACTGTGTATAGAGGAATCCTCGTCCATTTTGAGAGACCTGTTGCTGTAAAAGTGTTGAAGCTCCAAACACATGGGGCATCGAAGAGTTTCATGGCCGAATGCAAAGCTTTAGGAAAAATCAAGCACAGAAACCTTGTCAACATATTGACTTGTTGTTCAAGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGTCTAATGGGAGTTTAGAAAGCTTGTTGCACAACACCATTGAAGATAGTGAGTCCACAAATCTGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTTAGAAGAAGCTGTAGTTCATTGTGATATTAAGCCAAGCAATGTTGTTCTTGATGATGAAGTTGTTGCTCACTTGGCAGACTTTGGATTAGCTAGGCTCGTTCATGGTGTTGCAGGCCGTTCTAGCAGTGATAATCAAGCTAGTTCCTCTGCAATTAAGGGAACCATTGGATATATTCCACCAGAGTATGGAGCAGGATCTCCAGTATCACCAGAAGGAGATATGTATAGCTATGGAATTCTTCTTTTGGAGATGCTCACTGGAAAGAAGCCAACTGATACCATGTTTAGTGAAGGTCTAAGCCTACCCAATTTCTGTAACATGGTAACTCTAGATGGAATCGCTGAGATTGTTGATTCAAGATTGCTCATTCCAATTGATCAACAAGAAAGAAGAAGGGTTACACAGCAGCAAAATATGGAAGACATCATTCGAGAGTGTCTTGTGTCCTTTGCTAGTATTGGAGTTGCATGTTCTCAAGAGTTTCCAAATCAGCGAATGAGCATAAAAGATGTCATAACTGAATTGCATGCAATCAAACAAAAGCTATCATGCTAA 3081 0.395 MLILSPSHYNEIMMVSLIMFLLSVASQTLAVNAALSSETDKIALLALKDKLTNGDPHALPSWNQSLHFCAWEGITCSRRHMRVSALQLQNQDWGGTLAPSLGNLTFLRLINLTNINLHGEIPREVGYLKRLQILDLGHNNLHGHIPMQMINCSSLQVFLLRFNNLTGKIPSWFGSMMQLTQLALAVNNFVGSIPPSLGNLSSLEKLSLSYNHLEGSITPTLGRLSTLKFLGLGVNNFSGQVPPSLYNLSNIQLLEFVDNQLVGTLLSNLPMAFPNLELLVCGGNRFTGTFPSSISNLSELQQFDISENDFHGPISPTIGSLRKLQIFNVGQNRFGNGRAHDLDFLFSLTNCTQLQKLAFYNNNLGGVLPDIIGNLSTNLVLLDMALNQISGRISEEIGKLINLRTLGMDENSFEGTIPDSMGKLKNLGALWLRGNKFYGNIPLVIGNLTMLSDVHLDSNKFEGFIPFTLGNCTKMEKFYAHENNLRGDIPYQTFGYQQGLVELSLYSNSFTGHIPSEFGNLIHLSLLYLQENMLIGEIPMELSACSALTVLVLERNSFHGSVPSFLGSLLSLEVLDLSSNNFSSTIPHQLVNLTLLKTLNLSFNHLYGEVPVGGVFNNVTAISLVGNKNLCGGVPQLNLSACPMLPSQKKHKISLKKRVVLVIAFGGILISCVAFISIYLVKKKAKKLATTSLALQYAYVKVSYGELHQATNGFSSSNLVGTGRFGTVYRGILVHFERPVAVKVLKLQTHGASKSFMAECKALGKIKHRNLVNILTCCSSVDYKGDDFKAIVFEFMSNGSLESLLHNTIEDSESTNLSLNLMQRVNIALDVAFALDYLHNDLEEAVVHCDIKPSNVVLDDEVVAHLADFGLARLVHGVAGRSSSDNQASSSAIKGTIGYIPPEYGAGSPVSPEGDMYSYGILLLEMLTGKKPTDTMFSEGLSLPNFCNMVTLDGIAEIVDSRLLIPIDQQERRRVTQQQNMEDIIRECLVSFASIGVACSQEFPNQRMSIKDVITELHAIKQKLSC* 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0604 1026 SUPERFAMILY Protein kinase-like (PK-like) 696 1017 IPR011009 -
Amo07g0604 1026 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Amo07g0604 1026 Gene3D Ribonuclease Inhibitor 39 153 IPR032675 -
Amo07g0604 1026 SUPERFAMILY L domain-like 348 632 - -
Amo07g0604 1026 SMART LRR_typ_2 128 152 IPR003591 -
Amo07g0604 1026 SMART LRR_typ_2 400 424 IPR003591 -
Amo07g0604 1026 SMART LRR_typ_2 569 592 IPR003591 -
Amo07g0604 1026 SMART LRR_typ_2 200 224 IPR003591 -
Amo07g0604 1026 SMART LRR_typ_2 593 618 IPR003591 -
Amo07g0604 1026 SMART LRR_typ_2 521 545 IPR003591 -
Amo07g0604 1026 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Amo07g0604 1026 Pfam Leucine rich repeat 154 213 IPR001611 GO:0005515
Amo07g0604 1026 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Amo07g0604 1026 PANTHER LRR RECEPTOR-LIKE KINASE 41 1026 - -
Amo07g0604 1026 Gene3D Ribonuclease Inhibitor 175 344 IPR032675 -
Amo07g0604 1026 Gene3D Ribonuclease Inhibitor 345 643 IPR032675 -
Amo07g0604 1026 Gene3D Phosphorylase Kinase; domain 1 675 795 - -
Amo07g0604 1026 Pfam Protein kinase domain 716 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0604 1026 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 41 1026 - -
Amo07g0604 1026 SUPERFAMILY L domain-like 37 334 - -
Amo07g0604 1026 ProSiteProfiles Protein kinase domain profile. 714 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0604 1026 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Amo07g0604 1026 Gene3D Transferase(Phosphotransferase) domain 1 796 1025 - -
Amo07g0604 1026 Coils Coil 967 987 - -
Amo07g0604 1026 SMART serkin_6 714 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0604 Amo-Chr7 7374825 7378235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0604 34 1024 Receptor kinase-like Gene Family AT3G47570 43.587 0.0 780
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo07g0604 Pkinase 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0604 - - ahf:112766919 1637.08