Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0576 ATGCAGAAAGCTGTAGGGGGATTGATCATCATCATAGCGCTTCTTACGGTGGTTGGTGTGGGTCGGTGTCAGCGTAGTGCCAGTGATGCAGATGTGCTTCGAATTCTGAAAACCACCATCAATGCTCCAATGAGCTTTCAATGGACGGACCCTGACGTATGCAAATGGAGGCGCATTCAATGTGATTCGGCGAAACGCGTCACTGCCATACAAATTGGAAACCAGAATCTTCAAGGCACTCTCCCCAAGGAGCTTGAGAAGCTGTCAGCAYTGCAAAACTTGGAGTGCCAAGGCAACAGTCTCACAGGATCGTTCCCTTATCTTCCCAAATCGGTGCAAAAGTTGATCATTCATGACAACAAATTCAACAGCATACCCAATGGCATCTTCAAAGGGTTGGGTCCTTTGCCTCCAAGCCTTGGTAGTAGTTCAATTGAGACCGTTTTGGTCAACGGTAACTCTAGACTAAACGGTACCATTTCTGTATTGAAAACCATGACATCCCTTAAGCAATTTTGGGCTCATGGCAATGCATTTACCGGTCCTATACCAGACATGTCAAACCATAATCATCTCTATGATATGAACTTAAGGGACAACCAGTTGACTGGTGTTATTCCACTCTCACTTACCACTCTTCCAAGTTTGGAAGTTGTGAATTTAACTAACAATCTCTTTCAAGGGTCCCCTCCCAAGTTCAAAGATGGTGTAGGAGTTGACAATTACTTGGATAAAGGGAGAAATCAATACTGCACACCCATTCCTGGGGAACCATGCAGTAGTGTTGTGAATGCTTTACTATCTGCTATTGAGCCCTTGGGTTATCCTCTGATTTTTGCTAAGACTTGGTGGGGTAATGATCCATGTGGTAATAAATGGCTTGGKATAATTTGCTCAGGTGGGAACATTTCAGTTGTTAACTTTCAAGGCATGGGTTTGTCAGGTGCCATTTCTCCTAGTTTTGCTAGCCTTACATCTGTCACAAAGTTGGTTCTTTCAAACAATAATTTTACTAGTAAAATACCAACTGAACTTACCACTATGCCTCATTTGCAGGAATTAGATGTTTCCAATAATAATTTATATGGTAATGTACCTAAATTTCGGGATGGTGTAGTTCTTAAATTAGATGGGAATCCTGATATTGGAAAGGATATACCCAGGATTTTGATATATATGTTCTTGTGCCGCAAAAAGCCTAAGCATGCAAGAAAGTTTCAACATCCAACCGCAATTGTGATACACCCTAATCAATCTAGTGATAGAAATGCCATATTAAAGATAGCAAGTGCTGGTGTTCATGGTGGAGGAGCAGAAGTATTCAGTCCTTCTAGTAATGCTTACCAAGTTGAATCCAGTGGTAATCTTTTGATCTCAATTGACGTTTTGAAAGCAGTGACTAATAATTTTGCTGAAGAAAACGTGCTAGGAAAAGGTGGCTTTGGCACTGTATACAAAGGGAAATTGCATGATGGGACAAGGATTGCAGTTAAAAGGATGCAATCAGGAATAGTGGCAGAGAAGGGAGTAGATGAGTTCATGGCTGAAACGGCAGTGGTCACGATTYGACACAGGAATTTGGTTAATCTCATGGGGTATTGCTTGGATGAAAATGAGAGACTTCTTGTTTATGAATACATGCCTCAAGGTACTCTTAGTAGACATCTATTCCACTGGGAAAATGAAGGGTTAAAACCACTTGAATGGAAGACAAGGCTCATTATTGCTTTGGATGTTGCTAGAGGTGTTGAATATCTTCATGGTTTAGCCCAACAAACTTTTATCCATAGGGATCTCAAACCATCTAATATTTTGCTCGGCGATGATATGCGAGCTAAAGTTGCTGACTTTGGATTAGTTCGCCTTGCTCCGCAAGGAAAAGCCTCGTTTCAGACCAGACTTGCCAGAACTTTTGGATATCTAGCACCAGAGTATGCAGGTAGGTACATATTAAATGCTTATTTTTTTTATCTATACTATACTAGCCACTTGATTTAA 1998 0.4109 MQKAVGGLIIIIALLTVVGVGRCQRSASDADVLRILKTTINAPMSFQWTDPDVCKWRRIQCDSAKRVTAIQIGNQNLQGTLPKELEKLSALQNLECQGNSLTGSFPYLPKSVQKLIIHDNKFNSIPNGIFKGLGPLPPSLGSSSIETVLVNGNSRLNGTISVLKTMTSLKQFWAHGNAFTGPIPDMSNHNHLYDMNLRDNQLTGVIPLSLTTLPSLEVVNLTNNLFQGSPPKFKDGVGVDNYLDKGRNQYCTPIPGEPCSSVVNALLSAIEPLGYPLIFAKTWWGNDPCGNKWLGIICSGGNISVVNFQGMGLSGAISPSFASLTSVTKLVLSNNNFTSKIPTELTTMPHLQELDVSNNNLYGNVPKFRDGVVLKLDGNPDIGKDIPRILIYMFLCRKKPKHARKFQHPTAIVIHPNQSSDRNAILKIASAGVHGGGAEVFSPSSNAYQVESSGNLLISIDVLKAVTNNFAEENVLGKGGFGTVYKGKLHDGTRIAVKRMQSGIVAEKGVDEFMAETAVVTIXHRNLVNLMGYCLDENERLLVYEYMPQGTLSRHLFHWENEGLKPLEWKTRLIIALDVARGVEYLHGLAQQTFIHRDLKPSNILLGDDMRAKVADFGLVRLAPQGKASFQTRLARTFGYLAPEYAGRYILNAYFFYLYYTSHLI* 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0576 665 Pfam Protein kinase domain 471 645 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0576 665 PANTHER OSJNBA0070M12.3 PROTEIN 14 134 - -
Amo07g0576 665 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 390 648 - -
Amo07g0576 665 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 135 388 - -
Amo07g0576 665 Pfam Leucine rich repeat N-terminal domain 27 62 IPR013210 -
Amo07g0576 665 Pfam Leucine rich repeat N-terminal domain 280 299 IPR013210 -
Amo07g0576 665 Gene3D Ribonuclease Inhibitor 133 254 IPR032675 -
Amo07g0576 665 Gene3D Ribonuclease Inhibitor 26 132 IPR032675 -
Amo07g0576 665 Gene3D Transferase(Phosphotransferase) domain 1 547 654 - -
Amo07g0576 665 ProSiteProfiles Protein kinase domain profile. 470 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0576 665 SMART serkin_6 470 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0576 665 PANTHER OSJNBA0070M12.3 PROTEIN 390 648 - -
Amo07g0576 665 PANTHER OSJNBA0070M12.3 PROTEIN 135 388 - -
Amo07g0576 665 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 14 134 - -
Amo07g0576 665 SUPERFAMILY L domain-like 47 383 - -
Amo07g0576 665 Gene3D Ribonuclease Inhibitor 261 386 IPR032675 -
Amo07g0576 665 Gene3D Phosphorylase Kinase; domain 1 438 546 - -
Amo07g0576 665 Pfam Leucine rich repeat 320 361 IPR001611 GO:0005515
Amo07g0576 665 ProSitePatterns Protein kinases ATP-binding region signature. 476 498 IPR017441 GO:0005524
Amo07g0576 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Amo07g0576 665 SUPERFAMILY Protein kinase-like (PK-like) 450 649 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0576 Amo-Chr7 6863070 6865277 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0576 59 646 Receptor kinase-like Gene Family AT5G07280 29.936 4.00e-60 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Amo07g0576 Pkinase 9.3e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0576 - K00924 gmx:100788903 776.163