Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0554 ATGCGCAAGACAGTGACGAAACAATTTACCAAACACATGGTGCGCATAACATACCTGGCATTGTCATGGCTACTACTCTCGGCATTGTTAACGATTATGGTTACCATTCCAACCTCGGAGGCAAACAGTGGTAACGTTCCAGCAGTGATAGTTTTCGGAGATTCAACGGTGGATTCGGGAAACAACAACATGATAGCGACGGTTCTGAAGAGCAATTTCAGGCCATATGGGCGTGACTTTGAAGGGGGACAACCAACAGGAAGATTCAGTAACGGAAGGGTTCCGCCGGATTTCCTCGCGGAGGCGTTGGGGGTGAAAAGTTCAGTTCCGGCGTACTTGGATCCTGCATATAACATTGAAGATTTTGCCACTGGTGTTTGTTTTGCTTCTGCTGGAACCGGATATGATAATGCTACTTCTCATGTTCTTAATGTAATACCATTGTGGAAAGAATTGGAGTTCTACAAGGAGTACCAAGTAAAATTGAGAGAGCATCTTGGAGTAGAGAAGGCAAATCATATCATAAGAGAAGCTTTATATCTTATGAGCTTAGGAACCAATGATTTTCTTGAGAACTATTACATTTTCCCAACTAGAAGAYCTCAATTCACAGTTACACAATACCAAGATTTTCTATTGGGAATTGCTGAGAATTTCATTAGGGAATTGTATGCACTTGGAGCAAGAAAATTATCCATAACTGGCCTTGTTCCTATGGGGTGTCTCCCATTGGAGAGGGCTACAAATATCTTTGGWGARCATGCTTGCAATGAWYAATATAACAATGTGGCTTTGGGGTTRAATGCCAAGTTGGAGAATTTGATCTCAAAGCTTAATAGGGAACTGCCACAATTGAAAGCAATTTCAGCAAATGCATATGACATAGTTGATGATATCATTAAAAGGCCCTCCACATATGGATATGAGGAGGTAGAGAAAGCATGTTGTTCAACAGGAACATTTGAAATGAGCTACTTATGCAGTGACCAGAATCCACTTACATGCACTGATGCCTCCAAATATGTCTTTTGGGATGCCTTCCACCCCACAGAGAAGACGAACCATATTGTCTCAGATTATTTGCTACCAAAGATTCTTGCAAATTTTATATGA 1113 0.4097 MRKTVTKQFTKHMVRITYLALSWLLLSALLTIMVTIPTSEANSGNVPAVIVFGDSTVDSGNNNMIATVLKSNFRPYGRDFEGGQPTGRFSNGRVPPDFLAEALGVKSSVPAYLDPAYNIEDFATGVCFASAGTGYDNATSHVLNVIPLWKELEFYKEYQVKLREHLGVEKANHIIREALYLMSLGTNDFLENYYIFPTRRXQFTVTQYQDFLLGIAENFIRELYALGARKLSITGLVPMGCLPLERATNIFGEHACNXXYNNVALGLNAKLENLISKLNRELPQLKAISANAYDIVDDIIKRPSTYGYEEVEKACCSTGTFEMSYLCSDQNPLTCTDASKYVFWDAFHPTEKTNHIVSDYLLPKILANFI* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0554 370 Coils Coil 268 288 - -
Amo07g0554 370 SUPERFAMILY SGNH hydrolase 48 365 - -
Amo07g0554 370 CDD SGNH_plant_lipase_like 47 365 IPR035669 -
Amo07g0554 370 Gene3D SGNH hydrolase 37 367 IPR036514 -
Amo07g0554 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 34 369 - -
Amo07g0554 370 PANTHER GDSL ESTERASE/LIPASE EXL3 34 369 - -
Amo07g0554 370 Pfam GDSL-like Lipase/Acylhydrolase 49 361 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0554 Amo-Chr7 6559655 6565190 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0554 38 365 Pollen Coat Proteome AT1G75910 36.556 4.00e-66 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0554 - - adu:107496868 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0117 17 1501917 1505620 Amo07g0554 07 6559655 6565190 hybridization