Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0542 ATGAATATATTTGATCAATTCAAAAGGATTGATGAAATATGTAAAATTATGATTCAATTGGAAGAAAAGAAGGCAATTCATCAAACTCATTCATTCCTTTCTAAGATAATTGAGAGCAAGGTGCTCAAGTTCTTGGGCTTCATTTGGAACCCTCTTTTATGGGTGATGGAACTAGCTGCCATCATGGCCGCCATTGCATTAGCAATTGGAGGGAATGAGCCACCGGATTGGCAAGATTTTCTGGGTATAGTAGTGCTATTAATCATAAACTCCACCATCCGTTTTATAAAAGAGAATAATGCAGGAAAAGCGGCAGCAACACTCATGGCAGGCCTTGCCCCTAAAACCAAGGTATAA 357 0.3894 MNIFDQFKRIDEICKIMIQLEEKKAIHQTHSFLSKIIESKVLKFLGFIWNPLLWVMELAAIMAAIALAIGGNEPPDWQDFLGIVVLLIINSTIRFIKENNAGKAAATLMAGLAPKTKV* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0542 118 Gene3D - 47 118 - -
Amo07g0542 118 PANTHER PLASMA MEMBRANE ATPASE 33 118 - -
Amo07g0542 118 SUPERFAMILY Calcium ATPase, transmembrane domain M 37 113 IPR023298 -
Amo07g0542 118 PANTHER CALCIUM-TRANSPORTING ATPASE 33 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0542 Amo-Chr7 6397083 6399354 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0542 33 118 Primary Pumps ATPases AT2G07560 74.419 8.79e-27 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0542 K01535 - mus:103983169 132.88