Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0494 ATGGCACCAAAACCAACTAAGGCTGAGAAGAAGATCGCTTACGATGCTAAGCTCTGCAAGCTTCTCGAGGAGTACACTCAGATACTTGTGGTCAATGCTGATAACGTTGGATCTAACCAGCTCCAGAACATTCGAAGGGGTCTTCGTGGTGATTCTATTGTTCTTATGGGAAAGAACACCATGATGAAGCGTTCTGTTAGAATGCATGCTGAGAGTACCGGGAACAATGTGTACCTCAGCCTTATCCCTCTTCTTGTTGGAAACGTGGGATTGATCTTCACCAAAGGTGATTTGAAGGAGGTTAGCGAGGAGGTTGCTAAGTACAAGGTTGGAGCACCTGCTCGTGTTGGTTTGGTTGCTCCAATTGATGTTGTTGTTCCTCCAGGCAACACAGGGCTTGACCCCTCACAGACCTCTTTCTTCCAGGTTCTGAATATTCCAACCAAGATCAACAAGGGTACTGTTGAAATTATCACCCCTGTGGAACTTATTAAGAAGGGTGACAAGGTCGGTTCTTCTGAAGCTGCACTGCTTTCCAAGCTTGGCATCAGGCCCTTCTCATATGGTCTTGTTGTCCTCTCTGTCTATGACAATGGTTCAGTATTTAGCCCTGAGGTTCTTGATCTCACTGAGGACGACCTTGTTGAGAAGTTCGCCGTTGGAGTCTCAATGGTGACCGCACTCTCATTGGCCATTTCATACCCGACCCTTGCAGCTGCCCCACATATGTTCATCAACGCCTACAAGAATGTTTTATCTGTTGCCATTGAGACAGATTACTCTTTCCCAGAGGCTGACAAGGTTAAGGAGTATTTGAAGGACCCCAGCAAATTTGCCGTGGCAGCTGTTGCTGCTCCTGCTGCTGGCACAGGTGGTGCTCCGGCTGCTGCCGCTGCTAAGGAAGAGGAAAAGAAGGAAGAGCCTGCTGAAGAATCTGATGATGACATGGGTTTCAGTCTGTTTGACTAG 969 0.4778 MAPKPTKAEKKIAYDAKLCKLLEEYTQILVVNADNVGSNQLQNIRRGLRGDSIVLMGKNTMMKRSVRMHAESTGNNVYLSLIPLLVGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLSKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLVEKFAVGVSMVTALSLAISYPTLAAAPHMFINAYKNVLSVAIETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAGTGGAPAAAAAKEEEKKEEPAEESDDDMGFSLFD* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0494 322 Pfam 60s Acidic ribosomal protein 234 321 - -
Amo07g0494 322 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-1 1 322 - -
Amo07g0494 322 Pfam Insertion domain in 60S ribosomal protein L10P 114 183 IPR040637 -
Amo07g0494 322 MobiDBLite consensus disorder prediction 307 322 - -
Amo07g0494 322 SUPERFAMILY Ribosomal protein L10-like 8 134 IPR043141 -
Amo07g0494 322 PIRSF L10E 1 322 IPR030670 GO:0042254
Amo07g0494 322 Pfam Ribosomal protein L10 7 108 IPR001790 -
Amo07g0494 322 MobiDBLite consensus disorder prediction 287 322 - -
Amo07g0494 322 CDD Ribosomal_P0_L10e 9 185 - -
Amo07g0494 322 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 322 - -
Amo07g0494 322 Gene3D - 6 209 IPR043141 -
Amo07g0494 322 Gene3D - 114 185 IPR043164 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0494 Amo-Chr7 5493269 5495758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0494 1 321 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 82.866 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0494 K02941 - gmx:100777482 543.502