Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0481 ATGTTTCTCCTATCTATCACTTCACAAACCTTAGCTGTGAATGTGGCCTTGAGTTCAGAGACCGATAAGATTGCTTTGCTTGCTTTGAAGGACAAGCTTACCAATGGCGATCCTCATGCTCTGCCATCATGGAATGAGTCTCTACATTTCTGTGAATGGCAGGGCGTTACATGCAGTCGCCGCCACATGAGAGTCTCATCCCTACAACTGCAAAATCAATACTGGGGTGGTATTCTTGCGCCATCCTTAGGAAATCTAACGTTCCTCAAGGAGATCAATTTTACTAACATCAACTTGCATGCTTTTATAAGTATATATCTTTTCAAGAAAAAGGTAAAAAAGTTACCCACTACTTCTCTAGCTTTGCAATATCGCTATGTGAAGGTTTCTTATGGAGAGTTACATCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAAGCTTTGGTTCTGTGTATAGAGGAACCCTTGTGCATTTTGAGAGACCTGTTGCTGTGAAGGTGTTGAAGCTTCAAACAAGCGGGGCATCCAAAAGTTTCATGGTTGAATGCAATGCTCTAGGAAAAATCAAGCACAGAAACCTTGTCAACATATTGACTTGTTGTTCAAGTGTTGACTACAAAGGGAATGATTTCAAGGCTATAGTGTTTGAGTTCATGCCTAATGGGAATCTAGAAGCCTTGTTGCACAACACTATTGAAGATAGCGTGTCCACAAATCTGAGTCTCAACCTAATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGAGAAAGTTGTAGTTCATTGTGATATAAAGCCAAGTAATGTTCTACTTGATGACGAAGTTGTTGCTCATTTGGGAGACTTTGGATTAGCTAGACTCATTCATGGTGCCGCAAGTCGTTCTAGCAGTGGTCAAGCTACTTCCTCTACAATTAAGGGAACCATCGGATATCTTCCACCAGAGTATGGAGCAGGTGGCTCAGTGTCACCGCAAGGAGACATGTATAGCTATGGAATTCTCCTTTTGGAGATGCTCACTGGAAAGAAGCCAACTGATACCATGTTTGGTGAAGGTCTGAGCTTGCACAAAGAAGTTGGTCATTTGAAGAGACTGCAGATTCTTGACTTGAGGCAAAATAATCTTCATGGAGAGATTCCCATAGAGATGATAAATTGTTCAAGCCTTCAAGTAATTATATTGCTATACAATAATCTAACTGGCGAAGTTCCTTCATGGTTTGGTTCTATGATGCAACTGACTCAGCTGGGGCTTGGTGCTAACGGGTTTGTTGGTAGTATACCACCTTCATTGGGAAATCTCTCATCTCTTGAGAAGTTGTCACTTGCATACAATCAATTGGAAGGAAGCATAACTCCAACTTTGGGTAGGTTGTCAACTTTGAAATTTTTGGGTTTGGGTGTAAATAATTTTTCTGGTCAAGTTCCTCCTTCACTTTATAACCTTTCAAATATTCAAGTTCTTGATTTCACGGAAAACCAGTTAGTGGGTAATTTTCTCTCAAATTTACCTATGGCTTTTCCCAATCTTGAGATACTTTTGTGTGGAGGGAACCGATTCACCGGTACTTTTCCGTCTTCAATATCCAACCTTTCTGAGCTGCAACAGTTTCAAATATCCAAAAATGATTTTTATGGACCAATTTCTCCTACCGTAGGAAGTTTACACAAACTCCAGATATTTAATGTTGGACGGAATAGATTCGGAAATGGAAGAGCTCATGATTTGGATTTTCTTTCCTCATTGACTAATTGCACTCAATTGCAGAAATTAGGCTTTTATGAAAATTATTTAGGTGGAGTATTGCCAGATATCATAGGCAACTTATCAACCAATCTCGTTTTGCTTGGTATGGCTTTGAATCAAATATCTGGAAGGATACCAGAAGGAATTGGAAAACTAGTCAACCTAGCAACACTTGATATGGAGGGGAATTTTCTTGAGGGAACAATCCCAGATTCAATAGGAAAGCTAAAAAATCTTGGAGTGTTGTGGTTGGATGGAAATAAGTTCTATGGCAACATCCCTCTTGTCATTGGTAACCTTACTATGCTGTCTGACGTTGATCTGAGCTCAAATAAATTTGAAGGACTCATTCCCTTTACACTTGGATACTGCACCAACATGCAAAAATTTGCTGCATATGGAAACAACTTAAGTGGTAATATACCCAATCAAACATTTGGCAACCAGCAAGGCTTAATACAGTTGTTTCTATACTCCAACTCTTTTACCGGCCCCATTCCTTCTGATCTTGGAAACTTGAACCATCTTTCCATCTTGCATTTACAAGATAACAAGCTCATTGGTGAGATTCCCACGAGACTTAGTGCTTGCTCTGCTTTAACAGAGCTCGTACTAGAAAGAAACTCATTCCATGGAAGTATACCTTCATTCTTGGGATCTCTACTATCCCTTGAAATCTTGGACCTTTCTAATAACAACTTCTCAAGCACAATCCCACATGAACCTGTGAATCTCACGTTTCTGAATACTTTGAACTTATCTTTTAACCATCTCTCTGGTGAGGTCCCGGTAGGAGGGGTATTCAATAATGTCACAGCAATATCACTTGCCGGAAACAAAGATCTTTGTGGTGGGATACCTCAATTGAATCTCCCTACATGCTCTACGTTGCCCTTAAAGAAGAAACACAAGAGATCTGTTAAAAAGAAAGTCATCCTCATAGTCGCATTTGGAGGGATTCTAATCACTTCCGCTGCCTTTATTATTAGTATATATCTTCTCAAGAAGAAGCAAAAAAGGTTATCCACTCCTTCTCTAGCTTTGCAATATGGCTATGTAAAGGTTTCTTATGGAGAACTACATCAAGCAACCAATGGATTTTCTTCCTTAAATTTAATTGGCACAGGAAGCTCTGGCTCAGTATATAGAGGAACCCTTGTCCATTTTGAGAGACCTGTTGCTGTGAAGGTGTTGAATCTTCAAACACGCGGAGCATCGAAGAGTTTCATGTCCGAATGCAAAGCTCTAGGAAAAATGAAGCACAGAAACCTTCTCAATATATTGATCTGTTGTTCAGGTGTTGATTACAAAGGTGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTTTAGAAACCTTGTTGCACAACACCATTGAAGATAGCGAGTCCACAAATTTGAGTCTCAACCTGATGCATAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTCAGAGGAAGCTGTAGTTCACTGTGATGTTAAGCCAAGTAATGTTCTACTTGATGATGACATTGTTGCTCACTTGGGAGACTTTGGGTTAGCTAGGCTTCTTCATGGGAATGCCACAAGCTATACTAGTAGTAATCAAGCTAGTTCCTCTGTTATTAAGGGAACCATCGGATACCTTCCACCAGAGTATGGAGCAGATGGATCAGTATCACCACAGGGAGACATCTATAGCTATGGAATTCTTCTTTTAGAAATACTAACCGGAAAGAGACCAACTGATGGCATGTTTGGTGAAGATCTAAGCCTACACAAATTCTGTAAACTGGCAATTCCAGAAGGAATTACTGAGATTGTTGATTCAAGATTGATAACTCTGTTTGATGAAGGAGAAAGAAGGATCACACAACAGAAAAACATGATGGAGTGTTTAGTGTCTTTTGCTAGGATTGGAGTTGCATGTTCTGAAGAGTTTCCCACTCAACGGATGAACATTAAAGATGTCATAATGGAGCTGCATGCAATTAAACACAAACTGCTTCCTTAG 3813 0.3963 MFLLSITSQTLAVNVALSSETDKIALLALKDKLTNGDPHALPSWNESLHFCEWQGVTCSRRHMRVSSLQLQNQYWGGILAPSLGNLTFLKEINFTNINLHAFISIYLFKKKVKKLPTTSLALQYRYVKVSYGELHQATNGFSSSNLVGTGSFGSVYRGTLVHFERPVAVKVLKLQTSGASKSFMVECNALGKIKHRNLVNILTCCSSVDYKGNDFKAIVFEFMPNGNLEALLHNTIEDSVSTNLSLNLMQRVNIALDVAFALDYLHNDSEKVVVHCDIKPSNVLLDDEVVAHLGDFGLARLIHGAASRSSSGQATSSTIKGTIGYLPPEYGAGGSVSPQGDMYSYGILLLEMLTGKKPTDTMFGEGLSLHKEVGHLKRLQILDLRQNNLHGEIPIEMINCSSLQVIILLYNNLTGEVPSWFGSMMQLTQLGLGANGFVGSIPPSLGNLSSLEKLSLAYNQLEGSITPTLGRLSTLKFLGLGVNNFSGQVPPSLYNLSNIQVLDFTENQLVGNFLSNLPMAFPNLEILLCGGNRFTGTFPSSISNLSELQQFQISKNDFYGPISPTVGSLHKLQIFNVGRNRFGNGRAHDLDFLSSLTNCTQLQKLGFYENYLGGVLPDIIGNLSTNLVLLGMALNQISGRIPEGIGKLVNLATLDMEGNFLEGTIPDSIGKLKNLGVLWLDGNKFYGNIPLVIGNLTMLSDVDLSSNKFEGLIPFTLGYCTNMQKFAAYGNNLSGNIPNQTFGNQQGLIQLFLYSNSFTGPIPSDLGNLNHLSILHLQDNKLIGEIPTRLSACSALTELVLERNSFHGSIPSFLGSLLSLEILDLSNNNFSSTIPHEPVNLTFLNTLNLSFNHLSGEVPVGGVFNNVTAISLAGNKDLCGGIPQLNLPTCSTLPLKKKHKRSVKKKVILIVAFGGILITSAAFIISIYLLKKKQKRLSTPSLALQYGYVKVSYGELHQATNGFSSLNLIGTGSSGSVYRGTLVHFERPVAVKVLNLQTRGASKSFMSECKALGKMKHRNLLNILICCSGVDYKGDDFKAIVFEFMPNGSLETLLHNTIEDSESTNLSLNLMHRVNIALDVAFALDYLHNDSEEAVVHCDVKPSNVLLDDDIVAHLGDFGLARLLHGNATSYTSSNQASSSVIKGTIGYLPPEYGADGSVSPQGDIYSYGILLLEILTGKRPTDGMFGEDLSLHKFCKLAIPEGITEIVDSRLITLFDEGERRITQQKNMMECLVSFARIGVACSEEFPTQRMNIKDVIMELHAIKHKLLP* 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0481 1270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 273 285 IPR008271 GO:0004672|GO:0006468
Amo07g0481 1270 SUPERFAMILY L domain-like 19 103 - -
Amo07g0481 1270 Pfam Leucine rich repeat N-terminal domain 20 59 IPR013210 -
Amo07g0481 1270 SUPERFAMILY Protein kinase-like (PK-like) 944 1261 IPR011009 -
Amo07g0481 1270 SUPERFAMILY L domain-like 596 880 - -
Amo07g0481 1270 SMART serkin_6 963 1269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0481 1270 SMART serkin_6 141 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0481 1270 SUPERFAMILY Protein kinase-like (PK-like) 123 367 IPR011009 -
Amo07g0481 1270 ProSiteProfiles Protein kinase domain profile. 141 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0481 1270 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1095 1107 IPR008271 GO:0004672|GO:0006468
Amo07g0481 1270 SUPERFAMILY RNI-like 368 662 - -
Amo07g0481 1270 Gene3D Ribonuclease Inhibitor 520 586 IPR032675 -
Amo07g0481 1270 Gene3D Ribonuclease Inhibitor 17 124 IPR032675 -
Amo07g0481 1270 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 372 1268 - -
Amo07g0481 1270 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 23 103 - -
Amo07g0481 1270 PANTHER LRR RECEPTOR-LIKE KINASE 101 371 - -
Amo07g0481 1270 PANTHER LRR RECEPTOR-LIKE KINASE 23 103 - -
Amo07g0481 1270 SMART LRR_typ_2 648 672 IPR003591 -
Amo07g0481 1270 SMART LRR_typ_2 769 793 IPR003591 -
Amo07g0481 1270 SMART LRR_typ_2 696 719 IPR003591 -
Amo07g0481 1270 SMART LRR_typ_2 817 840 IPR003591 -
Amo07g0481 1270 SMART LRR_typ_2 448 472 IPR003591 -
Amo07g0481 1270 SMART LRR_typ_2 841 866 IPR003591 -
Amo07g0481 1270 SMART LRR_typ_2 376 400 IPR003591 -
Amo07g0481 1270 ProSiteProfiles Protein kinase domain profile. 963 1269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0481 1270 PANTHER LRR RECEPTOR-LIKE KINASE 372 1268 - -
Amo07g0481 1270 Gene3D Ribonuclease Inhibitor 418 519 IPR032675 -
Amo07g0481 1270 Pfam Protein kinase domain 143 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0481 1270 Pfam Protein kinase domain 965 1197 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0481 1270 ProSitePatterns Protein kinases ATP-binding region signature. 147 170 IPR017441 GO:0005524
Amo07g0481 1270 Gene3D Phosphorylase Kinase; domain 1 924 1044 - -
Amo07g0481 1270 Gene3D Transferase(Phosphotransferase) domain 1 1045 1268 - -
Amo07g0481 1270 Gene3D Transferase(Phosphotransferase) domain 1 223 415 - -
Amo07g0481 1270 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 101 371 - -
Amo07g0481 1270 ProSitePatterns Protein kinases ATP-binding region signature. 969 992 IPR017441 GO:0005524
Amo07g0481 1270 Gene3D Phosphorylase Kinase; domain 1 125 222 - -
Amo07g0481 1270 Gene3D Ribonuclease Inhibitor 587 898 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0481 Amo-Chr7 5336407 5351226 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0481 16 94 Receptor kinase-like Gene Family AT3G47570 40.506 5.12e-14 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo07g0481 Pkinase 2.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0481 - - ahf:112766919 1421.37