Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0477 ATGCTCACATTGTCACGGTCATACTGCAACAAAATAATAATGATGGTGTCCCTCATCATGTTTCTCTTATCTATCGCTTCTCAAACCTTGGCTATGCATGTGGCCTTGAGTTCAGAGACCGATAAGATGGCTTTGCTTGCTTTGAAGGACAAGCTTATCAATGGCGATCCTCATGCTCTGCCATCATGGAATCAATCTCTTCATTTCTGTAAATGGCAGGGCGTTACATGCAGTCGCCGCCGAATGAGAGTCTCAGCCGTGCAACTTCCAAATCAATACTGGGGTGGTACTCTTGCACCATCCTTGGGAAATCTAACGTTCCTAAGGGTGATCAATCTTACTAACACCCACTTGCATGGTGACATTCCAAGAGAACTTGGTCATTTGAAGAGGCTGCAAATTCTTGACTTGAGCAACAATAATCTTCAAGGTCAAATTCCAAGGGAGATGATAAATTGTTCAAGTCTTGAGGTAATTCTTATGTGGAAAAATAATCTAACCGGCAAAATTCCTTCCTGTATCCCGCCGTCTTTGGGAAATCTTTCATCGCTTCAGAAGCTGTCATTTACATACAATCATTTGGAAGGAAGCATAACTCCAGCTTTGGGTAGGTTGTTGAATTTGAACCATTTGGCTTTGGGTGCAAATAATTTTTCTGGCCAAGTCCCTCCGTCACTTTACAACCTTTCAAATATTGAAGTTCTTGAATTTGCGGAAAACCAGTTAGTAGGTACTCTTCTCTCTAATATATCTATGGCTTTTCCCAATATTGAGAGTTTTCTATGTGGAGGAAACCGATTCACTGGTACTTTCCCATCTTCAATATCCAATCTTTCCGAATTGCAAGTGTTTGATATTGAAGAAAATGATTTTCATGGATCAATTTCTCCTACTTTGGGAAGTTTACACAAACTCCGGATATTTGATGTTGGTATTAATAGATTCGGGAGTGGAAGCGCTCACGATTTGGATTTTCTTTCCTCACTAAAGAATTGTACTCAATTGCAAAAACTAGGCATTCATCAAAATTATTTAGGCGGTGTATTGACAGATCTCATAGGCAACTTGTCAAGCAATCTCGTTCAGCTTGTTATGGGGTCCAATCAAATCTCTGGAAGGATACCGGAAGAAGTTGAAAAACTAATCAACCTAGAAGCACTTGGTTTGGACCAAAATTCCCTTGAAGGAACAATTCCATATTCAATTGGAAAGCTAAAGAATCTGGTAAAGTTGGCGTTGGCGGGAAATAAGTTGTTTGGCAACATTCCTCTTGTCATCGGTAACCTTACTATGTTGTCTGAAATTGATCTCGGCTCAAATAAATTTGAAGGATTCATTCCTTTTACACTTGGAAATTGCACCAAGATGGAGATATTTTATGCTCCTAATAACAACTTAAGTGGTAATATACCCAATCAAACCTTTGGCAACCAACAAGGTTTAATAGAGCTGTCCCTATACTCCAACTCCTTTACCGGCCCCATTCCTTCTGATCTTGGCAACTTGAACCATCTTTCCATCTTGCATTTACAAGATAACAAGTTCATTGGTGAGATTCCCATGGGACTTAGTGCTTGCTCTGCTTTAATAGAGCTTGTACTAGGAAGCAACTTGATCCATGGAAGTATACCTTCATTCTTGGGATCTCTATTGTCCCTTGAAATTTTGGACCTTTCGAATAACAACTTCTCAAGCACAATCCCGCATCAACTTGTGAATCTCACGTTGCTGAAGACTTTGAACTTATCTTTCAACCATCTCTCTGGTGAAGTCCCAATAGGAGGAGTATTTAATAATGTCACAGCAATATCACTTGTTGGAAACAAAGATCTTTGCGGAGGGATACCTCAATTGAATCTTCCTGCATGTCCTATGTTGCCCTTACAGAAGAAACACAAGAGATCACTTAAAAAGAGAGTCATCCTCATCATTGCATTGGGAGGAATTCTAATCTCTTGTGTAGCTTTTATTAGTATATATCTTCTCAAGAAAAAGGCAAAAAAGTTACCCACTACTTCTCTGGCTTTGCAATATGGTTATGTGAAGGTTTCCTATGGAGAGTTACATCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTTGGCGCAGGAAGATTTGGGACTGTGTATAGAGGAATCCTCGTCCATTTTGAGAGACCTGTTGCTGTAAAAGTGTTGAAGCTCCATACACGCGGGGCATCGAAGAGTTTCATGGCCGAATGCAAAGCTCTAGGAAAGATCAAGCACAGAAACCTTGTCAACATATTGACTTGTTGTTCAAGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTCTAGAAACCTTGTTGCACAACACCATTGAAGATAGCGAGTCCACAAATCGGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTTAGAAGAAGCTGTAGTTCATTGTGATATTAAGCCAAGCAATGTTGTACTTGATGGTGAAGTTGTTGCTCACTTAGGAGACTTTGGATTAGCTAGGCTCGTTCATGGTGCCGCAAGCTGTTCTAGCAGTGGTCAAGTTAGCTCTTCTGCAATTAAGGGAACCATTGGATATATTCCCCCAGAATATGGAGCAAGTGGCTTAGTGTCACCAGAAGGAGACATGTATGGCTATGGAATTCTTCTTTTAGAGATGATCACTGGAAAGAAACCAACTGATAGCATGTTTGGTGAAGATCTAAGCCTACACAAGTTCTGTAACATGGCAACTCTAGATGGAATCACTGAGATTGTTGATTCAAGATTGCTCATTCCAATTGATCATCAAGAAAGAAGAAGGGTCACACAACAGCAAAATATGGAAGACACCATTCAAGAATGTCTTGTGTCGTTTGCTAGGATTGGAGTTGCATGCTCCCAAGAGTTTCCTAATCAGCGAATGACTATAAAAGATGTCATAAATGAGTTGCATGCAATTAAGCAAAAGCTATCCTGCTAA 3021 0.3999 MLTLSRSYCNKIIMMVSLIMFLLSIASQTLAMHVALSSETDKMALLALKDKLINGDPHALPSWNQSLHFCKWQGVTCSRRRMRVSAVQLPNQYWGGTLAPSLGNLTFLRVINLTNTHLHGDIPRELGHLKRLQILDLSNNNLQGQIPREMINCSSLEVILMWKNNLTGKIPSCIPPSLGNLSSLQKLSFTYNHLEGSITPALGRLLNLNHLALGANNFSGQVPPSLYNLSNIEVLEFAENQLVGTLLSNISMAFPNIESFLCGGNRFTGTFPSSISNLSELQVFDIEENDFHGSISPTLGSLHKLRIFDVGINRFGSGSAHDLDFLSSLKNCTQLQKLGIHQNYLGGVLTDLIGNLSSNLVQLVMGSNQISGRIPEEVEKLINLEALGLDQNSLEGTIPYSIGKLKNLVKLALAGNKLFGNIPLVIGNLTMLSEIDLGSNKFEGFIPFTLGNCTKMEIFYAPNNNLSGNIPNQTFGNQQGLIELSLYSNSFTGPIPSDLGNLNHLSILHLQDNKFIGEIPMGLSACSALIELVLGSNLIHGSIPSFLGSLLSLEILDLSNNNFSSTIPHQLVNLTLLKTLNLSFNHLSGEVPIGGVFNNVTAISLVGNKDLCGGIPQLNLPACPMLPLQKKHKRSLKKRVILIIALGGILISCVAFISIYLLKKKAKKLPTTSLALQYGYVKVSYGELHQATNGFSSSNLVGAGRFGTVYRGILVHFERPVAVKVLKLHTRGASKSFMAECKALGKIKHRNLVNILTCCSSVDYKGDDFKAIVFEFMPNGSLETLLHNTIEDSESTNRSLNLMQRVNIALDVAFALDYLHNDLEEAVVHCDIKPSNVVLDGEVVAHLGDFGLARLVHGAASCSSSGQVSSSAIKGTIGYIPPEYGASGLVSPEGDMYGYGILLLEMITGKKPTDSMFGEDLSLHKFCNMATLDGITEIVDSRLLIPIDHQERRRVTQQQNMEDTIQECLVSFARIGVACSQEFPNQRMTIKDVINELHAIKQKLSC* 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0477 1006 Pfam Leucine rich repeat N-terminal domain 39 78 IPR013210 -
Amo07g0477 1006 PANTHER LRR RECEPTOR-LIKE KINASE 41 1006 - -
Amo07g0477 1006 SUPERFAMILY L domain-like 358 613 - -
Amo07g0477 1006 Gene3D Transferase(Phosphotransferase) domain 1 777 1005 - -
Amo07g0477 1006 SUPERFAMILY Protein kinase-like (PK-like) 677 997 IPR011009 -
Amo07g0477 1006 Coils Coil 947 967 - -
Amo07g0477 1006 ProSitePatterns Protein kinases ATP-binding region signature. 701 724 IPR017441 GO:0005524
Amo07g0477 1006 Pfam Protein kinase domain 697 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0477 1006 ProSiteProfiles Protein kinase domain profile. 695 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0477 1006 SMART serkin_6 695 1005 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0477 1006 Gene3D Ribonuclease Inhibitor 174 321 IPR032675 -
Amo07g0477 1006 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 41 1006 - -
Amo07g0477 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Amo07g0477 1006 Gene3D Phosphorylase Kinase; domain 1 657 776 - -
Amo07g0477 1006 Gene3D Ribonuclease Inhibitor 322 627 IPR032675 -
Amo07g0477 1006 Pfam Leucine rich repeat 529 587 IPR001611 GO:0005515
Amo07g0477 1006 SUPERFAMILY RNI-like 90 419 - -
Amo07g0477 1006 PRINTS Leucine-rich repeat signature 132 145 - -
Amo07g0477 1006 PRINTS Leucine-rich repeat signature 550 563 - -
Amo07g0477 1006 Gene3D Ribonuclease Inhibitor 38 173 IPR032675 -
Amo07g0477 1006 SMART LRR_typ_2 429 452 IPR003591 -
Amo07g0477 1006 SMART LRR_typ_2 574 599 IPR003591 -
Amo07g0477 1006 SMART LRR_typ_2 502 526 IPR003591 -
Amo07g0477 1006 SMART LRR_typ_2 381 405 IPR003591 -
Amo07g0477 1006 SMART LRR_typ_2 181 205 IPR003591 -
Amo07g0477 1006 SMART LRR_typ_2 129 153 IPR003591 -
Amo07g0477 1006 SMART LRR_typ_2 550 573 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0477 Amo-Chr7 5264362 5267720 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0477 35 1004 Receptor kinase-like Gene Family AT3G47570 43.330 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo07g0477 Pkinase 3.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0477 - - ahf:112766919 1519.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0313 17 5020906 5024275 Amo07g0477 07 5264362 5267720 hybridization