Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0475 ATGCTCATATTGTCACAGTCACACTACAACAAAATAATGATGGTGTTTCTCATCATGTTTCTCCTATCTATCACTTCACAAACCTTGGCTGTGAATGTGGCCTTGAGTTCAGAGACTGATAAGATTGCTTTGCTTGCTTTGAAGGACAAGCTTACCAATGGCGATCCTCATGCTCTGCCATCATGGAATGAGTCTCTCCATTTCTGTGCATGGGAGGGCATTACATGCAGTCGCCGTCACATGAGAGTCTCAGCCTTGCAACTGCAAAATCAAGACTTGGGTGGTATTCTTGCGCCATCCTTGGGAAATTTAACATTCCTCAGGGAGATGAATCTTACTGGCATCAACTTACATGGTCAGATTCCAAGAGAAGTTGGTCATTTGAAGAGACTGCAGATTCTTGACTTGAGGCAAAATAATCTTCATGGAGAGATTCCTATAGAGATGTTAAATTGTTCAAGCCTTCAAGTAATTATATTGCTATACAATAATCTAACTGGCAAAGTTCCTTCATGGTTTGGTTCTATGATGCAACTTACTCAACTGGGGCTTGCTTCCAACGGGTTTGTTGGTAGTATCCCACCTTCATTGGGAAATCTCTCATCTCTTGAGAAGTTGTCACTTGCATTCAATCATTTGGAAGGAAGCATAACTCCAACTTTGGGTAGGTTGTCAACTTTGAAATTTTTGGGTTTGGGTGTAAATAATTTTTCTGGTCAAGTTCCTCCTTCACTTTACAACCTTTCAAATATTCAACTTCTTGAATTTACGAGAAACCAGTTAGTAGGTACTCTTCTCTCAAGTATATCTATGGCTTTTCCCAATATTGAGTCATTTCAATGTGGAGGGAACCGATTCATTGGTACTTTCCCATCTTCAATATCCAATCTTTCCCAATTGCAAGAGTTTGATATTGCAGAAAACGATTTTCATGGACCAATTTCTCCTAATTTGGGAAGTTTACACAAACTCCGAATATTCGATATTGGTATTAATAGATTCGGGAGTGGAAGCGCTCACGATTTGGATTTTCTTTCCTCATTAAAGAATTGTACTCAATTGCAAGAACTAGGCTTTTATCAAAATTATTTTGGCGGTGTATTGACAGATATTATAGGAAACTTATCAAGCAATCTCATTCAGCTTGCTATGGGGTCCAATCAAATATCTGGAAGGATACCTGAAGGAATTGAAAAACTAAGCAACCTAGAAGCACTTGCTATGGAGAAAAATTCCCTTGAAGGGACAATTCCATATTCAATTGGAAAGCTAAAGAATCTGGTAGCGTTGTGGTTGGCCGGAAATAAGTTGTTTGGCAACATTCCTCTTGTCATTGGTAACCTTACTATGTTGTCTGATGTTCATCTCGACTCAAATAAATTTGAAGGATTCATTCCTTTTACACTTGGAAACTGCACCAAGATGGAGAGATTTTATGCTCATGAAAACAACTTAAGTGGCAATATACCCAATCAAACATTTGGCTACCAACAAGGTTTAATAGAGCTGTCCCTATACTCCAACTCCTTTACTGGCCCCGTTCCTTCTGATCTTGGCAACTTGAACCATCTTTCCATCTTGCACTTACAAGATAACAAGTTCATTGGTGAGATTCCCATGGGACTTAGTGCTTGCTCTGCTTTAACAGAGCTCGTACTAGGAAGAAACTCATTCCATGGAAGTATACCTTCATTCTTGGGATCTCTACTATCCCTTGAAATTTTGGACCTTTCTAATAACAACTTCTCAAGCACAATCCCGCATCAACTTGTGAATCTCACCTTGCTGAAGACTTTGAACTTCTCTTTCAACCATCTCTATGGTGAAGTCCCGGTAGGAGGAGTATTTAATAATGTCACAGCAATATCACTCGTTGGAAACAAAGATCTTTGCGGCGGGATACCTCAATTGAATCTTCCTGCATGCCCTATTTTGTCCTTACAGAAGAAACACAAGAGATCACTTAAAAAGAGAGTCATTCTCATCGTTGCATTTGGAGGAATTCTAATCTCTTGTGTAGCTTTTATTAGTATATATCTTCTCAAGAAAAAGGCAAAAAAGTTAGCCACTACTTCTCTAGCTTTGCAATATGGTTATGTGAAGGTTTCCTATGGAGAGTTACATCAAGCAACCAATGGATTTTCTTCATCCAATTTAGTTGGGGCAGGAAGATTTGGGACTGTGTATAGAGGAATCCTCATCCATTTTGAGAGACCTGTTGCTGTAAAAGTGTTGAAGCTCCATACACGCGGGGCATCGAAGAGTTTCATGGCCGAATGCAAAGCTCTAGGAAAGATCAAGCACAGAAACCTTGTCAACATATTGACTTGTTGTTCAAGTGTTGATTACAAAGGGGATGATTTCAAGGCCATAGTGTTTGAGTTCATGCCTAATGGGAGTTTAGAAAGCTTGTTGCACAACACCATTGATGATAGCGAGTCCACAAATCCAGGTCTCAGCCTTATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTTAGAAGAAGCTGTAGTTCATTGTGATATTAAGCCAAGCAATGTTGTACTTGATGATGAAGTTGTTGCTCACTTAGGAGACTTTGGATTAGCTAGGCTCGTTCATGGTGCCGCAAGCTGTTCTAGTAGTAATCAAGCAAGCTCTTCTGCAATTAAGGGAACCATTGGATATATTCCCCCAGAATATGGAGCAAGTGGCTTAGTGTCAGCAGAAGGAGACATGTATAGCTATGGAATTCTTCTTTTAGAGATGATCACCAGAAAGAAGCCAACTGATAGCATGTTTGGTGAAGATCTAAGCCTACACAAGTTCTGTAACATGGCAACTCTAGATGGAATCACTGATATTGTTGATCCAAGATTGCTCATTCCAATTGATCATCAAGAAAGAAGAAGGGTCACACAACAGCAAAATATGGAAGACACCATTCGAGAATGTCTTGTGTCGTTTGCTAGGATTGGAGTTGCATGCTCCCAAGAGTTTCCTAATCAGCGAATGACTATAAAAGATGTCATAAACGAGTTGCATGCAATTAAGCAAAAGCTATCCTGTTAA 3078 0.3947 MLILSQSHYNKIMMVFLIMFLLSITSQTLAVNVALSSETDKIALLALKDKLTNGDPHALPSWNESLHFCAWEGITCSRRHMRVSALQLQNQDLGGILAPSLGNLTFLREMNLTGINLHGQIPREVGHLKRLQILDLRQNNLHGEIPIEMLNCSSLQVIILLYNNLTGKVPSWFGSMMQLTQLGLASNGFVGSIPPSLGNLSSLEKLSLAFNHLEGSITPTLGRLSTLKFLGLGVNNFSGQVPPSLYNLSNIQLLEFTRNQLVGTLLSSISMAFPNIESFQCGGNRFIGTFPSSISNLSQLQEFDIAENDFHGPISPNLGSLHKLRIFDIGINRFGSGSAHDLDFLSSLKNCTQLQELGFYQNYFGGVLTDIIGNLSSNLIQLAMGSNQISGRIPEGIEKLSNLEALAMEKNSLEGTIPYSIGKLKNLVALWLAGNKLFGNIPLVIGNLTMLSDVHLDSNKFEGFIPFTLGNCTKMERFYAHENNLSGNIPNQTFGYQQGLIELSLYSNSFTGPVPSDLGNLNHLSILHLQDNKFIGEIPMGLSACSALTELVLGRNSFHGSIPSFLGSLLSLEILDLSNNNFSSTIPHQLVNLTLLKTLNFSFNHLYGEVPVGGVFNNVTAISLVGNKDLCGGIPQLNLPACPILSLQKKHKRSLKKRVILIVAFGGILISCVAFISIYLLKKKAKKLATTSLALQYGYVKVSYGELHQATNGFSSSNLVGAGRFGTVYRGILIHFERPVAVKVLKLHTRGASKSFMAECKALGKIKHRNLVNILTCCSSVDYKGDDFKAIVFEFMPNGSLESLLHNTIDDSESTNPGLSLMQRVNIALDVAFALDYLHNDLEEAVVHCDIKPSNVVLDDEVVAHLGDFGLARLVHGAASCSSSNQASSSAIKGTIGYIPPEYGASGLVSAEGDMYSYGILLLEMITRKKPTDSMFGEDLSLHKFCNMATLDGITDIVDPRLLIPIDHQERRRVTQQQNMEDTIRECLVSFARIGVACSQEFPNQRMTIKDVINELHAIKQKLSC* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0475 1025 Coils Coil 966 986 - -
Amo07g0475 1025 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Amo07g0475 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Amo07g0475 1025 SUPERFAMILY L domain-like 352 632 - -
Amo07g0475 1025 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 40 1025 - -
Amo07g0475 1025 SUPERFAMILY Protein kinase-like (PK-like) 696 1016 IPR011009 -
Amo07g0475 1025 ProSiteProfiles Protein kinase domain profile. 714 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0475 1025 ProSitePatterns Protein kinases ATP-binding region signature. 720 743 IPR017441 GO:0005524
Amo07g0475 1025 Gene3D Ribonuclease Inhibitor 177 339 IPR032675 -
Amo07g0475 1025 Gene3D Phosphorylase Kinase; domain 1 675 795 - -
Amo07g0475 1025 SMART serkin_6 714 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0475 1025 SMART LRR_typ_2 200 224 IPR003591 -
Amo07g0475 1025 SMART LRR_typ_2 569 593 IPR003591 -
Amo07g0475 1025 SMART LRR_typ_2 424 448 IPR003591 -
Amo07g0475 1025 SMART LRR_typ_2 128 152 IPR003591 -
Amo07g0475 1025 SMART LRR_typ_2 521 545 IPR003591 -
Amo07g0475 1025 Gene3D Ribonuclease Inhibitor 39 153 IPR032675 -
Amo07g0475 1025 Gene3D Ribonuclease Inhibitor 340 650 IPR032675 -
Amo07g0475 1025 Gene3D Transferase(Phosphotransferase) domain 1 796 1024 - -
Amo07g0475 1025 Pfam Leucine rich repeat 547 606 IPR001611 GO:0005515
Amo07g0475 1025 SUPERFAMILY L domain-like 37 333 - -
Amo07g0475 1025 PANTHER LRR RECEPTOR-LIKE KINASE 40 1025 - -
Amo07g0475 1025 Pfam Protein kinase domain 716 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0475 Amo-Chr7 5232471 5236243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0475 34 1023 Receptor kinase-like Gene Family AT3G47570 43.932 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo07g0475 Pkinase 3.9e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0475 - - ahf:112766919 1612.43