Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0474 ATGGAATGCACCATTCGAGAGTGTCTTGTGTCCTTTGCTAGGATTGGAATTGCATGTTCTGAAGAGGTTCCCTCTCAACGAATGGGCATAAAAGATGTCATAAAGGAGTTACATGCAATTAAACAGAATTCATTCATGATTTGGTTCTATGATGAAACTCCCTCAACTGAGGCTTGGACCAACGGTTTTGTTGGTAGTATCCCACCTTCTTTGGGAAATCTTTCATCGCTTGAGAAGTTGTCTCTTGCACTCAATCATTTGGAAGGAAGCATAACTCTAGCATTGGGTAGGTTGTTCGAATTTGAAAGTTTTCGCTTTGAAAGTATTGATAGATCTCTGAAGGTTCACTTATTAATTATTATGGATGAGAATGTCTTTCAGGGACCAATTCTAAATTCAATTAGAAAGCTTAAAAATATAGTAACGGATAAGATAGCGTTGCTTGCTTTGAAGGACAAGCTTACCAATGGCAACCATGATGCTCTGCCATCATGGAATGAGTCTCTCCATTTCTGTGAATGGCAGGGCGTTACATGCAGTCGTCGCCGAATGAGAGTCACAGCCTTGATACTACAGAATCAATACTGGGGTGGTACTCTTGCACCATCCTTGGGAAATCTAACGTTCCTCAAGGCAATCTTTCTTACTAACATCCACTTGCGTGGTGAGATTCCGAGGGAAATTGGCCATTTAAAGAGGCTGCAGATTCTTGACTTGAAGCAGAATAATCTTCATGGTCAAATTCCTATGCAGATGATAAATTGTTCAAGCCTTTATTGGATTATTTTGACTTATAATAATCTAACTGGTAAAGTTCCTTCATGGTTTGGTTCTATGGTGCAACTTACTCATCTGGGGATTGCAGTCAACAGTTTTGTTGGTAGTATTCCGCCTTCTTTGGGAAATCTTTCATCGCTTGAGCAGTTGTCACTTACATACAATCATTTGGAAGGAAGTATAACTCCAGCATTGGGTAGGTTGTCGAATTTGAATTTTTTGGCTTTGGGTGGAAATAAATTTTCTGGCCAAGTCCCTTATTCACTTTACAACCTTTCAAATATTCAAGTTTTTTCAGTCACAGATAACCAGTTAGTGGGTAATACTCTTCTCTTAAATATACCTATGGCTTTTCCCTATCTTAGGGAATTTACGTGTGGAGGGAACCGATTCACTGGTACTTTTCCATCTTCAATATCCAACCTTTCTGAATTGCAAGTGTTTGATATAGGTGACAATGGTTTTCATGGACCAATTTCTCCTAAGTTGGGAAGTTTACACAAACTCCAGATATTTTTTGTTCCTTTGAATAGATTCGGGAGCGGAAGGGCCTACGATTTGGATTTCCTTTTCTCGCTAGTGAATTGTACTCAATTGCAAAAACTGGTCATTGAGGAAAATTATTTAGGCGGTGTATTGACAGATACCATAGGCAATTTATCAAGCAATCTTGATATTCTTGTTATGGGATCCAATCAAATATCTGGAAAGATACCTGAAGGAATTGGAAAACTAATCAACCTAAAAACACTTGGTATGGAGAGAAATTCCCTTGAGGGAATAATTCCATATTCCATTGGAAAGCTAAAGAATATGGTACGGTTGACGTTGCAGGAAAATAAGTTATATGGCAAGATTCCTCTTGTTATTGGTAACCTTACTATGTTATCTGAAGTTCAACTGTACTCGAATAAATTTGAAGGAATCATTCCTTTTACACTTGGAAACTGCACCAAGATGGAGATATTTTATGCTCATGAAAACAACTTAAGTGGTAACATACCCAATCAAACATTCGGCTACCAACAAGGTTTAATAGCACTGTCCTTATTCTCCAACTCTTTCACTGGTCCCATTCCTTCTGAACTTGGTAACTTGATCCATCTTTCAGTCTTATATTTGCAAGAGAACAAGCTGATTGGTGAGATTCCCATGGAACTTAGTGCTTGCTCTGCTTTAACAGAGCTTGTACTAGAAAGCAACTTGATCCATGGAAGTATACCTTCATTCTTGGGATCTCTACTATCCCTTGAAATCTTGGACCTTTCTAATAACAACTTCTCAAGCACAATCTCACATGAACTTGTGAATCTCAAGTTTCTAAGTATGTTGAACTTATCTTTCAACCATCTCTCTGGTGAAGTCCCGGAAGGAGGAGTGTTTAATAACATCACAGCAATATCACTCTTTGGAAATAAAGATCTTTGCGGTGGGATACCTCAATTGAATCTTTCTGCATGCCCTATGTTGCCCTTGCAAAAGAAACACAAGAGATCTCTTAAAAAGAGAGTCATCCTCTTCATTGCATTTGGAGGGGTTCTAATATCTTTTGTGGCTTTTATTAGTATATATCTTTTCAAGAAAAAGGCAAAAAAATTATCTACTACTTCGCTAGCTTTGCAATATGGCTATGTGAAGGTTTCTTATGGAGAGCTACATCAAGCAACAAATGGATTTTCTTCATCCAATTTAGTTGGCACAGGAACCTTTGGCTCTGTGTACAGAGGAAACCTTGTTCATTTTAAGAGACCTGTTGCTGTCAAAGTGTTGAACCTTCAAACACACGGGGCATCAAAGAGTTTCATGGCTGAATGCAAAGCTCTAGGAAAAATCAAGCACAGAAACCTTCTCAGCATATTGACTTGTTGTTCAAGTGTTGATTACAAAGGGAATGATTTCAAGGCCATAGTATTCGACTTCATGTCTAATGGGAGTCTAGAAACCTTGTTGCACAACAGAATTGAAGATAGCGAGTCCACAAATCTGAGTCTCAACCTGATGCAAAGAGTAAATATTGCTCTTGATGTAGCTTTTGCATTGGATTATCTTCACAATGATTTAGAAAAAGCTGTAGTTCATTGTGATATTAAACCAAGCAATGTTCTACTTGATAATGAAGTTGTTGCTCACTTGGGAGACTTTGGATTAGCTAGGCTCGTTCATGGTGCCGCAAGCCGTCCTAGCAGTGGTCAAGCTACTTCCTCTACAATTAAGGGAACCGTTGGATATATTCCACCAGAGTATGGAGCAGGTGCCTCGGTGTCAGCAGAAGGAGACATGTATAGCTATGGAATTCTCCTTTTGGAGATGCTCACTGGAAAGAAGCCAACTGATACCATGTTTGCTGAAGGTTTAAGCCTACACAATTTCTGTAACGCGGCAACTCTAGAACGAATCACTGAGATTGTCGATTCAAGATTGCTCATTCCAATTGCTAAACAAGAGGGGAGAAGGGTCACAAGTCAGCAAAATATGGAAGGCACCATTCAAGAGTGTCTTGTGTCCTTTGCTAAGATTGGAATTGCATGTTCTGAAGAGGTTCCCACCCAACGAATGAGCATAAAAAATGTCATAAAGGAGTTACATGCAATTAAACAGAAGCTGTTTTTATAA 3390 0.3891 MECTIRECLVSFARIGIACSEEVPSQRMGIKDVIKELHAIKQNSFMIWFYDETPSTEAWTNGFVGSIPPSLGNLSSLEKLSLALNHLEGSITLALGRLFEFESFRFESIDRSLKVHLLIIMDENVFQGPILNSIRKLKNIVTDKIALLALKDKLTNGNHDALPSWNESLHFCEWQGVTCSRRRMRVTALILQNQYWGGTLAPSLGNLTFLKAIFLTNIHLRGEIPREIGHLKRLQILDLKQNNLHGQIPMQMINCSSLYWIILTYNNLTGKVPSWFGSMVQLTHLGIAVNSFVGSIPPSLGNLSSLEQLSLTYNHLEGSITPALGRLSNLNFLALGGNKFSGQVPYSLYNLSNIQVFSVTDNQLVGNTLLLNIPMAFPYLREFTCGGNRFTGTFPSSISNLSELQVFDIGDNGFHGPISPKLGSLHKLQIFFVPLNRFGSGRAYDLDFLFSLVNCTQLQKLVIEENYLGGVLTDTIGNLSSNLDILVMGSNQISGKIPEGIGKLINLKTLGMERNSLEGIIPYSIGKLKNMVRLTLQENKLYGKIPLVIGNLTMLSEVQLYSNKFEGIIPFTLGNCTKMEIFYAHENNLSGNIPNQTFGYQQGLIALSLFSNSFTGPIPSELGNLIHLSVLYLQENKLIGEIPMELSACSALTELVLESNLIHGSIPSFLGSLLSLEILDLSNNNFSSTISHELVNLKFLSMLNLSFNHLSGEVPEGGVFNNITAISLFGNKDLCGGIPQLNLSACPMLPLQKKHKRSLKKRVILFIAFGGVLISFVAFISIYLFKKKAKKLSTTSLALQYGYVKVSYGELHQATNGFSSSNLVGTGTFGSVYRGNLVHFKRPVAVKVLNLQTHGASKSFMAECKALGKIKHRNLLSILTCCSSVDYKGNDFKAIVFDFMSNGSLETLLHNRIEDSESTNLSLNLMQRVNIALDVAFALDYLHNDLEKAVVHCDIKPSNVLLDNEVVAHLGDFGLARLVHGAASRPSSGQATSSTIKGTVGYIPPEYGAGASVSAEGDMYSYGILLLEMLTGKKPTDTMFAEGLSLHNFCNAATLERITEIVDSRLLIPIAKQEGRRVTSQQNMEGTIQECLVSFAKIGIACSEEVPTQRMSIKNVIKELHAIKQKLFL* 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0474 1129 SUPERFAMILY Protein kinase-like (PK-like) 800 1120 IPR011009 -
Amo07g0474 1129 PANTHER LRR RECEPTOR-LIKE KINASE 61 108 - -
Amo07g0474 1129 PANTHER LRR RECEPTOR-LIKE KINASE 141 1127 - -
Amo07g0474 1129 Pfam Leucine rich repeat 257 316 IPR001611 GO:0005515
Amo07g0474 1129 Pfam Leucine rich repeat 651 710 IPR001611 GO:0005515
Amo07g0474 1129 Pfam Leucine rich repeat N-terminal domain 143 180 IPR013210 -
Amo07g0474 1129 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 61 108 - -
Amo07g0474 1129 SUPERFAMILY L domain-like 481 736 - -
Amo07g0474 1129 SMART LRR_typ_2 552 575 IPR003591 -
Amo07g0474 1129 SMART LRR_typ_2 625 649 IPR003591 -
Amo07g0474 1129 SMART LRR_typ_2 303 327 IPR003591 -
Amo07g0474 1129 SMART LRR_typ_2 231 255 IPR003591 -
Amo07g0474 1129 SMART LRR_typ_2 673 697 IPR003591 -
Amo07g0474 1129 SMART LRR_typ_2 504 527 IPR003591 -
Amo07g0474 1129 SMART LRR_typ_2 74 98 IPR003591 -
Amo07g0474 1129 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 141 1127 - -
Amo07g0474 1129 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 4 43 - -
Amo07g0474 1129 Gene3D Ribonuclease Inhibitor 142 258 IPR032675 -
Amo07g0474 1129 Pfam Protein kinase domain 820 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0474 1129 ProSitePatterns Protein kinases ATP-binding region signature. 824 847 IPR017441 GO:0005524
Amo07g0474 1129 Gene3D Ribonuclease Inhibitor 445 750 IPR032675 -
Amo07g0474 1129 Gene3D Ribonuclease Inhibitor 371 444 IPR032675 -
Amo07g0474 1129 Gene3D Ribonuclease Inhibitor 263 370 IPR032675 -
Amo07g0474 1129 Gene3D Transferase(Phosphotransferase) domain 1 900 1127 - -
Amo07g0474 1129 SUPERFAMILY L domain-like 142 434 - -
Amo07g0474 1129 Gene3D Ribonuclease Inhibitor 55 141 IPR032675 -
Amo07g0474 1129 ProSitePatterns Serine/Threonine protein kinases active-site signature. 950 962 IPR008271 GO:0004672|GO:0006468
Amo07g0474 1129 Gene3D Phosphorylase Kinase; domain 1 779 899 - -
Amo07g0474 1129 ProSiteProfiles Protein kinase domain profile. 818 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0474 1129 SMART serkin_6 818 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0474 1129 PANTHER LRR RECEPTOR-LIKE KINASE 4 43 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0474 Amo-Chr7 5223317 5231154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0474 65 619 Receptor kinase-like Gene Family AT3G47570 31.690 2.90e-48 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo07g0474 Pkinase 2.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0474 - - ahf:112766919 1515.36