Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0445 ATGTATAATGAATTAAGACGGATTTTATCTAGGTACATAATCTTTGTATTCTCCTATTTTTTAGTAATACTTTATATTATGGTGTTGGGCGTCCTAGTGAGTTTGTATTTAAAATGCCGCCGAAGTTTGAAGGAGGACATACCTAAGTTCCAGACGCATCACCAGCAACAACCACAATTTGCTACGCTCACTATAGAAAAATTCTTGAATGATATCGAAAGGGAGAAGCCAGTAAGATTCACTGATCAGCAGTTACAAATTGCAACCGATAACTACTCTAATTTGTTGGGATCAGGAGGTTTCGGTGCTGTTTACAAAGGGATTTTCAATGGCGCCATGGTAGCCGTGAAGGTCCTGCATGGAAATTGTGACAAAAGAAGTCAAGCACAGTTTATGGCAGAAATGGGAACACTTGGTAAAATCCACCATTTCAATCTTGTTCGGTTATATGGCTTTTGTTTTGAAGAAAACTTGACAGCATTGGTTTATGAGTACATGGGAAATGGATCTCTTGACAAGTATTTGTTAAAAGAAAACAACACGTTAGGATTTGAAAAGCTTCATGAGATAGCGGTTGGAACTGCAAGAGGCATTGCTTATTTGCATGAAGACTGCCAACAAAGAATTATTCACTATGACATTAAACCGGCCAATATTTTATTGGACCGGAATTTCAATCCTAAGGTTGCGGATTTTGGTTTGGCAATGATTTATAACAGGGATAACACTCATATATCTATGACCGGTGGAGGAGGAGGCAGGGGAACCCCCGGTTACGCTGCGCCGGAGCTATGGATGCCGTTCCCGGTGACTCACAAATGCGATGTCTATAGCTTTGGAATGTTGTTGTTTGAGATCATAGGTCGGAGAAGAAATGTTGATAATAATGTTCCTGAAAGCCAAGAGTGGTTTCCAATGTGGAAACATAAGGAGATGGTAGAAAGAATGATTAAGGTAGCTTTGTGGTGTGTTCAGTATAGGCCAGAATCAAGGCCTATGATGAGTGCTGTTGTGAAAATGTTGGAAGGCTCTGAAGAAATTCCACAACCTTTGAACCCATTTCAATACTTGATGGACAATGGTTTCACTACTGCTCATGATCATTCACCTCAAGATTCATCAAATATGTACACTACTAGTACAACTTCAAGTGGTAGTGTGATTGTGGTGGAATCCAATAATATTGTATCTACTACTCCAATCAAGAGTCATAATGAGATCGAATTGTTAGTCTCTAGCTAG 1242 0.3945 MYNELRRILSRYIIFVFSYFLVILYIMVLGVLVSLYLKCRRSLKEDIPKFQTHHQQQPQFATLTIEKFLNDIEREKPVRFTDQQLQIATDNYSNLLGSGGFGAVYKGIFNGAMVAVKVLHGNCDKRSQAQFMAEMGTLGKIHHFNLVRLYGFCFEENLTALVYEYMGNGSLDKYLLKENNTLGFEKLHEIAVGTARGIAYLHEDCQQRIIHYDIKPANILLDRNFNPKVADFGLAMIYNRDNTHISMTGGGGGRGTPGYAAPELWMPFPVTHKCDVYSFGMLLFEIIGRRRNVDNNVPESQEWFPMWKHKEMVERMIKVALWCVQYRPESRPMMSAVVKMLEGSEEIPQPLNPFQYLMDNGFTTAHDHSPQDSSNMYTTSTTSSGSVIVVESNNIVSTTPIKSHNEIELLVSS* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0445 413 SUPERFAMILY Protein kinase-like (PK-like) 75 342 IPR011009 -
Amo07g0445 413 ProSitePatterns Protein kinases ATP-binding region signature. 96 117 IPR017441 GO:0005524
Amo07g0445 413 SMART serkin_6 90 341 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0445 413 ProSiteProfiles Protein kinase domain profile. 90 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0445 413 PANTHER RUST RESISTANCE KINASE LR10-RELATED 22 311 IPR045874 GO:0004672
Amo07g0445 413 PANTHER RUST RESISTANCE KINASE LR10-RELATED 310 409 IPR045874 GO:0004672
Amo07g0445 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Amo07g0445 413 Gene3D Phosphorylase Kinase; domain 1 64 165 - -
Amo07g0445 413 PANTHER PUTATIVE-RELATED 22 311 - -
Amo07g0445 413 PANTHER PUTATIVE-RELATED 310 409 - -
Amo07g0445 413 Gene3D Transferase(Phosphotransferase) domain 1 166 350 - -
Amo07g0445 413 Pfam Protein tyrosine and serine/threonine kinase 94 341 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0445 Amo-Chr7 4389419 4391885 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0445 76 389 Receptor kinase-like Gene Family AT1G56120 41.420 2.39e-66 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Amo07g0445 PK_Tyr_Ser-Thr 1.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0445 - - gmx:100803355 515.768