Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0420 ATGGGTTTTCAGACTATGGGTTCTCAGAGTAATGGGCAACAGTCTCATTTACAGTTACAGCCACCACAGTTATCTAGGCAAGGTTCATGGTATAGTCTCACACTTGATGAGGTTAATAATCAGCTAGGAGACTTGGGGAAGCCGATGGGGAGCATGAACCTCGACGAGCTTCTCCAAAATGTGTGGACTGCCGAGGCGAGTAAAGTTGTTGGGGTACAAAATGAGCAGATGTCATCGTCGTCTTCCCTTCAACGCCAGGCCAGTCTGACACTGGCCCGTGCGTTGAGCGGGAAGACGGTTGATGATGTTTGGAAAGAAATCCAACAGGGGCAGAAAAAACGATTTGGAGACAATGTTAAAATTGAAGGTGGAGAAATGACTTTTGGTGAAACAACATTAGAGGACTTTCTGGTACAAGCAGGTCTCTTTGCTGAAGCTTCTGTGAGTCCGAATGTGGGGTTGAACAGATTGGATTCTGCCACCACACAAAGTTTACAACAAAAATCAGGCGTGTCGCCGTCCGCTTCGGTTAGCAGTTTGTCGGACACAAAGCCGGGTCGCAAAAGGGATGCTCCAGATGCATATGAGAAAGCTTTAGAAAGGAGGCTGAGAAGGAAAATCAAGAATAGGGAATCTGCGGCACGCTCACGGGCAAGAAAACAGGCATATCATAATGAATTGGTTAGCAAGGTTTCTCGACTAGAAGAAGAAAATGTAAAGCTCAAGAAAGAGAAGGAATTCGAAGAGAAGCTACCATCCGAATCACAATCCGAACCAAAATATCAGCTCCGAAGAATAAGTTCTGCTTTTTTCTGA 816 0.4559 MGFQTMGSQSNGQQSHLQLQPPQLSRQGSWYSLTLDEVNNQLGDLGKPMGSMNLDELLQNVWTAEASKVVGVQNEQMSSSSSLQRQASLTLARALSGKTVDDVWKEIQQGQKKRFGDNVKIEGGEMTFGETTLEDFLVQAGLFAEASVSPNVGLNRLDSATTQSLQQKSGVSPSASVSSLSDTKPGRKRDAPDAYEKALERRLRRKIKNRESAARSRARKQAYHNELVSKVSRLEEENVKLKKEKEFEEKLPSESQSEPKYQLRRISSAFF* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0420 271 MobiDBLite consensus disorder prediction 242 271 - -
Amo07g0420 271 SUPERFAMILY Leucine zipper domain 201 247 IPR046347 GO:0003700|GO:0006355
Amo07g0420 271 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 38 269 IPR043452 GO:0003700|GO:0045893
Amo07g0420 271 SMART brlzneu 197 269 IPR004827 GO:0003700|GO:0006355
Amo07g0420 271 MobiDBLite consensus disorder prediction 162 182 - -
Amo07g0420 271 Gene3D - 199 251 - -
Amo07g0420 271 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Amo07g0420 271 MobiDBLite consensus disorder prediction 256 271 - -
Amo07g0420 271 Pfam bZIP transcription factor 201 246 IPR004827 GO:0003700|GO:0006355
Amo07g0420 271 CDD bZIP_plant_BZIP46 201 238 - -
Amo07g0420 271 MobiDBLite consensus disorder prediction 1 24 - -
Amo07g0420 271 PANTHER BZIP TRANSCRIPTION FACTOR 38 269 - -
Amo07g0420 271 MobiDBLite consensus disorder prediction 162 193 - -
Amo07g0420 271 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 199 244 IPR004827 GO:0003700|GO:0006355
Amo07g0420 271 Coils Coil 224 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0420 Amo-Chr7 4053663 4057448 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0420 24 271 bZIP Transcription Factor Family AT3G56850 46.831 7.59e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo07g0420 bZIP_1 1.7e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0420 K14432 - gmx:100798549 382.874