Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0408 TGTGAGAATTTCCACTCTTTATCATCAAACTTGAGCAACTGTTGCACCTCGCTCTTATCTCTAATCGGAATAGGGAAAGCAACTACAAATTTCAACCTCCCAAACCTTGAAACCTCAACCTCATGCGTCCATGATTTCCAGTCTCAGCTCAATTCCTTGTCTCTCCAAAACAACCTCGTTGACTTGTGCTTTGACCCTCACCAGTTCATCATGTCCCGAAACGTTGGTCAAATCACGCCTCTTGATACTAGTTGCAAACAAGACCTCACTGATCTTTTGCTATGTAATGTGTGTCTTACTGCGGGGTTTCAGGTGCAGCATAAACTTGTCTCCATTGATGGTAATGCTTCTCACTCTGAAAATTGTTTCAAATTTACTATTCTATATGCTGCTGCGTTTGTGAATCAGTATGGACCTGAAAGCAATGGTGCCATGAGTTGCATCTTTGGTATGTCACTTTACCCACAGGGTGATGGTTTTGTTGGAAAAAATCACCAGGATTTGGTTTTTGGGTTAACTGGTGCTGGTGTTGCTTTGTTAGTTATGTCTTGTTTGTTAGGAGTTTATGTTTGGTATGATAGGAAGGTTAGAAGGAAGAAGCTTAATGATGATGAATTTGATTTTGATCCTGAGGAACAAGGGTCTAGGCGTAGGTTGAGGCCGAATACGGGGTCTATTTGGTTCAAGATTGATGAGCTTGAGAAGGCTACTGATAATTTCTCAACCAAGAATTTCATTGGCAGGGGTGGATTTGGGCTTGTTTTCAAGGGGGTTTTGTCCGATGGTTCGGTTGTGGCGGTTAAGAGGATCTTGGAATKTGATTTTCAAGGGGATCAACCTGAAGCACCGGAATCTGGTGCCTCTTCGAGGCTGTTGTGTAGTGGTGATGATGATGAAAAATTTAATGACAGGAGAAGTCAGAGGTTTTTGGTTTATGATTACATGCCGAATGAAAATCTTGAAGACCATCTGTTTCTGGTGAGTGAGCAGCAAAAGTTGAAGAAATTGCTGACTTGGCCTCAAAGGAAGAGCATAATCTTGGATGTGGCAAAGGGGTTGGCTTATCTGTCGTGCGATGCATGTGTTCACGGKGATATATTTATCGTTCAAATTGGGATTAGGTGTGACCAAGGACGTTTCTTAAAGGTCTTTTATGAGATGGTGGCAAYATGA 1173 0.4203 CENFHSLSSNLSNCCTSLLSLIGIGKATTNFNLPNLETSTSCVHDFQSQLNSLSLQNNLVDLCFDPHQFIMSRNVGQITPLDTSCKQDLTDLLLCNVCLTAGFQVQHKLVSIDGNASHSENCFKFTILYAAAFVNQYGPESNGAMSCIFGMSLYPQGDGFVGKNHQDLVFGLTGAGVALLVMSCLLGVYVWYDRKVRRKKLNDDEFDFDPEEQGSRRRLRPNTGSIWFKIDELEKATDNFSTKNFIGRGGFGLVFKGVLSDGSVVAVKRILEXDFQGDQPEAPESGASSRLLCSGDDDEKFNDRRSQRFLVYDYMPNENLEDHLFLVSEQQKLKKLLTWPQRKSIILDVAKGLAYLSCDACVHGDIFIVQIGIRCDQGRFLKVFYEMVAX* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0408 390 Gene3D Phosphorylase Kinase; domain 1 214 290 - -
Amo07g0408 390 SUPERFAMILY Protein kinase-like (PK-like) 220 366 IPR011009 -
Amo07g0408 390 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 5 366 - -
Amo07g0408 390 ProSitePatterns Protein kinases ATP-binding region signature. 246 268 IPR017441 GO:0005524
Amo07g0408 390 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 366 - -
Amo07g0408 390 MobiDBLite consensus disorder prediction 277 299 - -
Amo07g0408 390 ProSiteProfiles Protein kinase domain profile. 240 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0408 390 Pfam SPARK 8 123 IPR043891 -
Amo07g0408 390 Pfam Protein tyrosine and serine/threonine kinase 243 366 IPR001245 GO:0004672|GO:0006468
Amo07g0408 390 Gene3D Transferase(Phosphotransferase) domain 1 299 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0408 Amo-Chr7 3850956 3854134 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0408 1 366 Receptor kinase-like Gene Family AT1G11050 47.103 1.14e-103 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Amo07g0408 PK_Tyr_Ser-Thr 2.8e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0408 - - ahf:114924878 500.36