Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0400 ATGGCTGAAATTTTCATCTCAATAGCAGCCAAGATCTCGGAATATGCGGTGGATTTAGCGATACGTCAAGGACAGTATCTGTTTCGTGCTGGAAGATTCATTAAGAATCTTGAAAAAGAAAAGCAGAAGCTGATTTCAACTCTAGGTAGTGTGCAGAAAAGAGTTGAAGCAACTGATAAAACAGAACAAGTCAAAGATTCTGTTCTGAAGTGGATCAATGAAGCCGAAAAGCTTGTAGAAGAGGTGGAGAATCTGGAAACAGAAATAGAGACTAATGGAAGTTGTTTCAAGGGACAATGTTCTATTGGGAAGAGATATAATCTGTGCAAGAAAATGCAACAGAAAATAGAGTCTCTAATAAATCTGAACAAAAATGGTCAATTTGATACTATTTCCTTCCCTGCTCCAATTCCAGGCAGTGAGTATTTATATCCTGGAAACATTGTTTACTTCAARTCCACAMARAAAGCTYCGGATCAAATTTTGGAGGCGTTGCAAGATGAYAGTATCAATTTGATTGGACTCTATGGAATGGGAGGTTCTGGTAAGACAATACTGGTGAAAGCAGTTGGTAACAAGGCCAAGACTATGAATCTTTTCGACCGAGTTGTGCTTGCCACTGTGTCASAAACTCCGGATATCAAAGWGATTCAGAAGGAAATTGCTGAATTGATGGGGCTGAAATTTTCTGAAGAAAATAAAGCATCAAGAGCAATAAGAATATCTTTGGGKCTGCAAAGTAAASAGAGAATTCTTGTGATCTTGGATGATGTTTGGGCTAAGCTYAAGCTTGAAGATATTGGAATTCCTTGTGAAGAGGGTAACCAAWGCAGCTGCAAGGTCCTTTTGACTACRCGTCTGCGTGGAGTTTGCACCTTGATGAACTGTCAAAGAGAGATTCCTTTACATCTCTTGTCAGAAGAGGAAGCTTGGATRTTTTTCAAAGAGTATTCAGGAATAGGTRACAATTCGCCATCCGAGSTATTAAAGGTGGCCTCAAATGTTGCTRTGGAATGTAAAGGGTTACCAATCGCAATYGAAGCAGTGGGATCTTCCWTGAAAAAGAAGCCTATTGAGGTCTRGAAGGCAGCATTATACAGTCTGAAACATTCAAAGCCAATGGATGTTGAAGATGGAGTGAGAGATGCCTTCTCSTGCATTGAATTAAGCTACAATCATTTGAGAAGCAAAAGAGATGAGTTAATGTTCTTGATGTGKAGTATGTTTCCMGAAGATCATGAGWTCTTTGTTGAAGATTTGATCAGATATGGAGTGGGATTAGGCATATGTGGCGAAGTTGAATCAATTGACACAGCAAGGAATCAGTTGAGAGCTAGTATTAACAAACTTGTAAACTCTTGTCTGCTGATGCACTCTGACAAAAACAAAGAACACTTTTCTAATGTGAATAGAGCAGATCATGTGAAGATGCATGACATGGTTCGCGACACTGCTTTGTGGATAGCATCTAGATCAGAGAACAAAAAGATTCTGGTAAATCTTGTTAAAGATCTAAACACCTTGGTTGAAAATGGAGACATCAATGATTATTTTGCAGTATCATCATGGAACAAGAAAACGAACCGGATTGCTGCTCAAGTCACTGCTCCAAAGCTTSAGTTTCTAYTGCTGAGTTCTAGAATGTCCTTGGATATAGCAARTGCATCTTTYGAAGGCCTTAAAGAGATCAAGGTTATGGCAATTATCAGTGAAGRTTATAGGACTTTGTTATCATTGCCACATTCAACTCAATCCTTGACTAACCTGCAAACTCTATGCTTGAGAGGATGGGATTTAGATGATATATCTTTCATATTGAACCTTACAAAGCTTGAGGTTCTTGATTTGCGAGCTTGTCGCTTCAAACAAATTCCGAAGGAAATTGAGAGATTGAATAAATTGAAGTTGCTGGATTTGCAAGGTTGTGCAGTTCTAGAAAACTATAATTCTGAAGCAATAGGAAATTGTGAACAGCTTGAAGAGTTATATGTTTCTGGACCTTCCTTCCAGAAGGATGATAAATGCATGTTTCCTTGTCAAACTTTTCTTGATGATGTTATATCTTCGAATYTACAGAGRYATRTATTAGAGCTTGGACCMTTACAAACTTATGGCCATGGCATCAATGAGAATTCTAGTGTGAGAGCTCTAAGCTTGAAAGAGTTTGATATATCCAAATTTGGTGCATCTAAGATGAATCTTCTGCAAAGAGCAGAGGAWATTTMCTTGAACCGCCTTCGYGGAGGATGTAAGAATGTTGCTCCAGAGTTGGTTAAAGCAGCCGGAAGCATGAATGATTTGACTAAGCTCAGGCTTCGCTCTTGTTCGGAGATAGAATGCATCATAGATACATCTTCTTCTGGGAGTTATTTTCAGTTAGATGCCTTGATGCCAGGTTTAGTCAAGTTAGAGCTGGAGGAAGTGGAAAACTTGAAAGAACTTTGCCATGGTTCACCTATGCATGCTCTTRGCTTCTTTGAGAAATTAGAAGAACTCTACATAAGGAAGTGTGAGCAGTTGCGCAACATTTTCCCTGCGAACTGCGAATTGCGCAGTCTTAAAATCCTTAAAATTGATGGCAGAGGACTTTATCAGCCAACTGTTGCCATCAGCTGCGCAGCGGTTGCACTATTCTCTATGTCTGCTGCCAAAAGTCTAGAACAATTAGAAGAGCTATCTATAGCAGATTGCAAGGATCTAAGGTGCATAATTTCAAATGAAGAAGATAATGGTAATGAGGACATATCTCAAGCTCTTAACAACTCACAATCAATGCTCCCAAATTTGAAGAAACTCTGCATTCATTATTGTCCAAAGTTAGAATTTGTGCTCCCAAGCTTTTGTGTTGGCCTTGAGAAATTGCAAGAGATAGATATTTTTAAGGCTTCAGAGCTGAAATATATCTTTGGCAATGAATATCAAAATGAGATCCAAACCAAGCTTCCCAATTTGAAATCACTCAAACTCCAGAACCTCGCGAATCTCATTCAGATATGCAGGGGAAACAGTCAGCCTTGGTGGCCATGTTTGAGGGAGCTAAGATGTGTTAACTGTCCAAAATTGAGCACATCTTGTGTCAATGTTATGGTTAGGTCAACAATGAGACAGCAGCATCTGCATAAGGGAGTTTCCCTTGAGGAGGATCAGGGAAAACATTTGGCCTCAGAATTAGAGCAAGTAGAATTTCGAGGCTTCTCCGAATTGAGGTTCATATGGTCTGATCCTACTAACAGACAGATTTTGGGTCTTCAACATCTTCAATATTTAAAGGTGGACGGCTGTGCGAAATTGAAATCGATCTTCTCAGCTGTGATTCTGAGAAGCCTACCCGAGTTGACATCGCTTGTTATACAAGGCTGCAATGAACTGGAAGAGATTGTTTCAGAGAATGAAGAACTTCATCATGATTTATCCAATACTAAAGTAGTGTGTTTCCCAAAGTTGAGAAACTTGACTGTCAAGAATTGCAACAAATTAAAAAGCATTTTCTCTGTTTCTGTGCTTGGAATGCCTCCTCAACTAAGTTATCTGCACATTTCAGATGCTGCTGAACTTGTACAAGTTTTCAGGAATAGTAGTGACAAGATTGTGTTTCCAAATCTCAGAGAAATGAAACTGAACAAACTACCATGTCTGGTGGACATTTGCATAGGATTTGAACTATTACAGCCAMTGAAAGCAGTGAAGATCATGGTAGATCAGTGCCCAAATTTTACTTCAATTTCTGAAGCAACTTAA 3738 0.3866 MAEIFISIAAKISEYAVDLAIRQGQYLFRAGRFIKNLEKEKQKLISTLGSVQKRVEATDKTEQVKDSVLKWINEAEKLVEEVENLETEIETNGSCFKGQCSIGKRYNLCKKMQQKIESLINLNKNGQFDTISFPAPIPGSEYLYPGNIVYFKSTXKAXDQILEALQDDSINLIGLYGMGGSGKTILVKAVGNKAKTMNLFDRVVLATVSXTPDIKXIQKEIAELMGLKFSEENKASRAIRISLGLQSKXRILVILDDVWAKLKLEDIGIPCEEGNQXSCKVLLTTRLRGVCTLMNCQREIPLHLLSEEEAWXFFKEYSGIGXNSPSEXLKVASNVAXECKGLPIAIEAVGSSXKKKPIEVXKAALYSLKHSKPMDVEDGVRDAFSCIELSYNHLRSKRDELMFLMXSMFPEDHEXFVEDLIRYGVGLGICGEVESIDTARNQLRASINKLVNSCLLMHSDKNKEHFSNVNRADHVKMHDMVRDTALWIASRSENKKILVNLVKDLNTLVENGDINDYFAVSSWNKKTNRIAAQVTAPKLXFLLLSSRMSLDIAXASFEGLKEIKVMAIISEXYRTLLSLPHSTQSLTNLQTLCLRGWDLDDISFILNLTKLEVLDLRACRFKQIPKEIERLNKLKLLDLQGCAVLENYNSEAIGNCEQLEELYVSGPSFQKDDKCMFPCQTFLDDVISSNLQRXXLELGPLQTYGHGINENSSVRALSLKEFDISKFGASKMNLLQRAEXIXLNRLRGGCKNVAPELVKAAGSMNDLTKLRLRSCSEIECIIDTSSSGSYFQLDALMPGLVKLELEEVENLKELCHGSPMHALXFFEKLEELYIRKCEQLRNIFPANCELRSLKILKIDGRGLYQPTVAISCAAVALFSMSAAKSLEQLEELSIADCKDLRCIISNEEDNGNEDISQALNNSQSMLPNLKKLCIHYCPKLEFVLPSFCVGLEKLQEIDIFKASELKYIFGNEYQNEIQTKLPNLKSLKLQNLANLIQICRGNSQPWWPCLRELRCVNCPKLSTSCVNVMVRSTMRQQHLHKGVSLEEDQGKHLASELEQVEFRGFSELRFIWSDPTNRQILGLQHLQYLKVDGCAKLKSIFSAVILRSLPELTSLVIQGCNELEEIVSENEELHHDLSNTKVVCFPKLRNLTVKNCNKLKSIFSVSVLGMPPQLSYLHISDAAELVQVFRNSSDKIVFPNLREMKLNKLPCLVDICIGFELLQPXKAVKIMVDQCPNFTSISEAT* 1246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0400 1245 SUPERFAMILY RNI-like 756 1181 - -
Amo07g0400 1245 PRINTS Disease resistance protein signature 172 187 - -
Amo07g0400 1245 PRINTS Disease resistance protein signature 245 259 - -
Amo07g0400 1245 PRINTS Disease resistance protein signature 339 353 - -
Amo07g0400 1245 PRINTS Disease resistance protein signature 629 645 - -
Amo07g0400 1245 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 745 913 - -
Amo07g0400 1245 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 24 783 - -
Amo07g0400 1245 Gene3D - 144 300 IPR027417 -
Amo07g0400 1245 PANTHER - 919 1136 - -
Amo07g0400 1245 Pfam NB-ARC domain 157 370 IPR002182 GO:0043531
Amo07g0400 1245 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 396 IPR027417 -
Amo07g0400 1245 Gene3D Ribonuclease Inhibitor 910 1047 IPR032675 -
Amo07g0400 1245 Gene3D Ribonuclease Inhibitor 1057 1196 IPR032675 -
Amo07g0400 1245 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 919 1136 - -
Amo07g0400 1245 PANTHER - 745 913 - -
Amo07g0400 1245 PANTHER - 24 783 - -
Amo07g0400 1245 Gene3D - 304 394 IPR042197 -
Amo07g0400 1245 Gene3D Ribonuclease Inhibitor 521 909 IPR032675 -
Amo07g0400 1245 SUPERFAMILY L domain-like 476 868 - -
Amo07g0400 1245 Coils Coil 34 54 - -
Amo07g0400 1245 Coils Coil 68 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0400 Amo-Chr7 3742140 3746044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0400 170 666 WRKY Transcription Factor Family AT5G45050 23.321 4.41e-11 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0400 - - lang:109341976 1643.25