Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0372 ATGCAAACAAACATGTCCTATTCTTGTTACTTCCTTCAAAGTGAGAACCTAAACAATAATTACCCTTTACTTCATAATTCAGAACACTATTGCACCCTTGAATCTTTTTCTACTAACCAAAACTCCCCATCTTCTCTTAGTTTCTCACCTGAGATTACTCCAATGTTGAAGCAAGACCGCATCGAACATGACAATGAATCTTGCTTGACACATGATCAAAATGACTTGAGCAACAAGATAAGGGAACTGGAAAGTGCTATGCTAGGATCTGATGCAGATATTCTAAACACATATGGTGCTGCTATGATTCCACAAGAATGTGACTCATTCTTGAGGTGGAGGAAAATGATGGAGGTGATATCGCGAGGCGATTTGAAAGAGATGCTTTGTGCTTGTGCAAAAGCAATGTCAGAGAATGACATGGAGACAACTGAATGGCTGATTTCTGAGCTGCAAAAAATGGTGTCGATTTCTGGGGATCCAGTCCAAAGATTAGGAGCATACATGTTGGAGGCACTTGTTGCAAGGCTAGCCACTTCAGGAAGCACAATCTACAATGCCTTGAGATGCAAGGAACCTACTGGCAATGAACTCCTTTCTTATATGCATATGCTTTATGAGATCTGTCCATACCTCAAATTCGGATATCTTTCTGCGAATGGATCGATAGCCGAAGCAATGAAGGATGAAAATGAAGTTCACATAATTGATTTTCAGATTAACCAAGGAGTTCAGTGGATAAGTCTCATAAAAGCACTTGCTGCAAGGCCTAATGGATCACCAAAGATCAGAATAACATGTTTTGATGACTCTACCTCTGCTTTTGCCAGAGGAGGAGGACTTAACATAGTTGGAGAAAGGTTATCAAGAATTGCGAATTCATGTAAGGTTCAATTTGAATTTCATGCTCTAGAAGTTTCCCCTTCTGAGGTGAAGCTTGATGATCTTGACATTAGGCCTGGTGAGTCCATTGCTGTGAATTTTGCCATGATGCTTCACCATTTACCGGATGAAAGCGTGGATAGCCGGATAAATCATCGCAACCGGTTGTTAAGACTGGCAAAGTTCTTGTCACCTAAGGTGGTTACCTTGGTTGAGCAAGATTGTAACACAAGTAATCTTCCTTTCTTCCCACGTTTTGTGGAAACAATGAACTACTACTTGGCTGTTTTCGAATCAATCGACGCAGCTCTTCCAAGAGATCACAAAGAGAGGATCAATGTGGAACAGCATTGCCTTGCTAGAGAAGTTGTTAATCTGATAGCATGTGAAGGTGCAGAAAGAGTCGAACGCCACGAGGCTCTGAAGAAGTGGAGATTGCGCTTCGAAAGGGCCGGATTTGCACCATATCCTTTGAGTTCTTATGTTAATTCTTTGATTAGGCAGCTTCAAGAAAGCTACCCTGGACAATACACTCTAGAAGAGAGAGATGATGCTTTACTTCTTGGTTGGAAAAATCAATCTCTTATTGTCTCTTGTGCTTGGAGATGA 1491 0.4118 MQTNMSYSCYFLQSENLNNNYPLLHNSEHYCTLESFSTNQNSPSSLSFSPEITPMLKQDRIEHDNESCLTHDQNDLSNKIRELESAMLGSDADILNTYGAAMIPQECDSFLRWRKMMEVISRGDLKEMLCACAKAMSENDMETTEWLISELQKMVSISGDPVQRLGAYMLEALVARLATSGSTIYNALRCKEPTGNELLSYMHMLYEICPYLKFGYLSANGSIAEAMKDENEVHIIDFQINQGVQWISLIKALAARPNGSPKIRITCFDDSTSAFARGGGLNIVGERLSRIANSCKVQFEFHALEVSPSEVKLDDLDIRPGESIAVNFAMMLHHLPDESVDSRINHRNRLLRLAKFLSPKVVTLVEQDCNTSNLPFFPRFVETMNYYLAVFESIDAALPRDHKERINVEQHCLAREVVNLIACEGAERVERHEALKKWRLRFERAGFAPYPLSSYVNSLIRQLQESYPGQYTLEERDDALLLGWKNQSLIVSCAWR* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0372 496 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 21 495 IPR005202 -
Amo07g0372 496 Pfam GRAS domain family 126 496 IPR005202 -
Amo07g0372 496 ProSiteProfiles GRAS family profile. 116 496 IPR005202 -
Amo07g0372 496 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 21 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0372 Amo-Chr7 3488954 3492012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0372 67 496 GRAS Transcription Factor Family AT1G50600 64.501 0.0 570
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Amo07g0372 GRAS 1.6e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0372 - - gmx:100817120 693.345