Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0370 ATGGACGCAGCTGCTACCATTACACCCACCACCTCGAGCTCAGGCTCAGAGCACCATGCCCGGGTCCATAAAGATCCGAATCCAACCGGGTCGGGTTTGAATGCTGAAGCTTCTGTTGGTGGGGCAAGGTACAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCTCGGTCGGCGTGCATAACCATACCTCCGGGGTTGAGTCCGACGTCGTTTTTGGAGTCTCCTGTGCTCCTTTCAAACATGAAGGTGGAGCCTTCACCAACTACAGGTTCCCTTCCAAGGATTCATCAAACAGCACATGGTTCTATGGTTTCTGCTGCATCAACTGCATTTCCTATAACTTCTGTATGCTTCCATAATAATACCGTTGATGACAGAAAATTGAGCTTCTTTGAGTATAAACCGCCTGGTAGATCGAATATGGTTCCTTCAGACTTCAACAACCATGAAAGTGAACAATCTTCTCGAATTGAAGGTCCAGGAAAAGCTCAACCATTTGCATCTTCACCATTAGCCGAAAGTGAGCCAGCGGACCCTTCTAATGAGTTAAGCCTGTCATCGCCTGTTCAAAAGATCAGTTCGGTTGAAGTTGATTTGGATGAGTTTAACCACAGAGGAAACGCATCCACTGGGCTTCAGGCATCACATGTTGAAGTTAGAGGCAGTGGAGCTCCGATCGCACCCGAGAAGGCATCTGATGATGGATACAATTGGCGAAAATATGGACAGAAACTTGTCAAAGGGAGTGAATTTCCCCGCAGCTATTACAAATGCACACATCCTAACTGTGAAGTGAAGAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAATATACAAAGGAACACATGATCATCCTAAACCTCAACCAAGCCGCCGATACTCTGCTGGTACCGGTATGTCTGTGCAAGAAGAGAGATCTGATAAGGCTTCTTTGGCCGGCCAAGATGACAGAGCATCCGGTATGTATGGTCGGGGATGTCAAGCAGCTGATCCCAACAGTACTCCAGAGCTATCTCCTCGGGCAACAAACGATGACAGTCCAGAGGGTGCTGGCTTTGTGTCAAATAGGACTAATGATGAGGTTGATGATGATGATCCCTTCTTGAAGAGAAGAAGAATGGAACTTGGAAATGCTGACATCACTCCTGTTGTTAAGCCTATCCGGGAGCCACGGGTAGTTGTACAAACTCTTAGTGAGGTTGATATTTTGGATGATGGCTACCGCTGGCGAAAGTATGGACAGAAGGTGGTAAGAGGCAACCCAAATCCTAGGAGTTATTACAAATGCACGAATGCCGGTTGCCCTGTAAGAAAACATGTGGAGAGGGCATCTCATGATCCAAAAGCTGTAATAACCACATACGAAGGTAAGCACAATCACGACGTACCGGCCGCAAGGAGTAGTAGCCACGACATGGCAGGACCGGCTGCAGCCGCGGCCGCGGCTGCAGCTGCAATGATTGGACATACAAGAATCAAGTTAGAAGAAAGCGATACGATTAGCCTCGACCTTGGTATGGGAATCAGCTCAGCAACTGAAAATAGATCAAAGGGCATTTCAGAATATGGTGAAAGTCAAAGTCAAATTCACACCAACAACAACAATTTCAAGTTTGTTCATACTTCCACTCCAGCTCCAGCAGCATACTTTGGTGTTCTAAATCACAGCTCAATTTCTTATGGTTCTAGAGAAAATAGGAATGATGCTCCATCTTTAAACCATTCCTCATATCCTTGCTCACAGAACATGGGAAGAATACTAACTGGTCCATGA 1785 0.465 MDAAATITPTTSSSGSEHHARVHKDPNPTGSGLNAEASVGGARYKLMSPAKLPISRSACITIPPGLSPTSFLESPVLLSNMKVEPSPTTGSLPRIHQTAHGSMVSAASTAFPITSVCFHNNTVDDRKLSFFEYKPPGRSNMVPSDFNNHESEQSSRIEGPGKAQPFASSPLAESEPADPSNELSLSSPVQKISSVEVDLDEFNHRGNASTGLQASHVEVRGSGAPIAPEKASDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIIYKGTHDHPKPQPSRRYSAGTGMSVQEERSDKASLAGQDDRASGMYGRGCQAADPNSTPELSPRATNDDSPEGAGFVSNRTNDEVDDDDPFLKRRRMELGNADITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARSSSHDMAGPAAAAAAAAAAMIGHTRIKLEESDTISLDLGMGISSATENRSKGISEYGESQSQIHTNNNNFKFVHTSTPAPAAYFGVLNHSSISYGSRENRNDAPSLNHSSYPCSQNMGRILTGP* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0370 594 MobiDBLite consensus disorder prediction 206 235 - -
Amo07g0370 594 Gene3D WRKY domain 226 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 Gene3D WRKY domain 392 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 SUPERFAMILY WRKY DNA-binding domain 230 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 MobiDBLite consensus disorder prediction 139 189 - -
Amo07g0370 594 MobiDBLite consensus disorder prediction 1 16 - -
Amo07g0370 594 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 SMART WRKY_cls 407 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 36 560 - -
Amo07g0370 594 ProSiteProfiles WRKY domain profile. 402 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 SUPERFAMILY WRKY DNA-binding domain 399 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 ProSiteProfiles WRKY domain profile. 227 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 MobiDBLite consensus disorder prediction 1 36 - -
Amo07g0370 594 MobiDBLite consensus disorder prediction 567 594 - -
Amo07g0370 594 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 Pfam WRKY DNA -binding domain 408 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo07g0370 594 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 36 560 IPR044810 GO:0003700
Amo07g0370 594 MobiDBLite consensus disorder prediction 282 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0370 Amo-Chr7 3479017 3483757 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0370 47 594 WRKY Transcription Factor Family AT4G26640 55.694 0.0 534
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo07g0370 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0370 - - gmx:100816583 889.797