Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0364 ATGTTTCCCATTTCAAGGATCCTATGCAACAAAAATGCCACCAATATTGTTGAGATAAGGCTTGAGAATTTGAACCTTAGTGGCACAATTGATGCTGATTCTCTATGCAAGCTTCAAAAATTAAGGGCTCTTAGCTTAGCCAACAACAACATCAAAGGCAAAATCCCACACTCAATTTTGCATTGTACAAGGTTGATGTACCTAAATCTTACAAGAAATCAATTGAGTGGGAATGTACCTACTAGATCCTTAGCCAAGTTGAAATTCCTCAAAAAATTGGACATATCCAACAACAATTTCATCCCAATTAAGCATAATAAGTTCTCTACATATTATGTGACACCAAATATCAAAGATGGGACAAAGGGTAGTATTGTAAATTCATCACCATATAATGATACCTCAAATAATGGTAAAGAAGGATCATCATCTCCAATAATATCTATGAAATTGTTAATACCATTGATCTTAGGGCTTGTAATTCTTTTAATATCACTTATCTTTGCCGCCAAGAAATTACCAAAGCTATGTAGAGAGGGAATAATAAAAGTACTAATAAGAAGTCATCAAGTTTCTCCATCATCACAAAAGTCCATAACAAGTGATCAAATGGTGAAGAAGGGTGGTTTAGAAGATCATTCACCATCACTAGGGCTTGTGTTCTTTGTTGAAAAAGAAGAGAGGTTCACCATGGAGGACTTGCTTCGCGCCGCGGCGGATCTAAGGAGTGAGAGCTTTTGTAGCAGCCTATACAAGGTGAAGCTTAATAATGTGGAGAATGATGTTCACTATGCTGTGAAGAGGTTAAAGAATGTTCAAGTTTCTTGTGAAGATGAGTTTGGAGAAACATTGAGGAAGATAAGCAAATTGAAGCATCCAAATATTCTTCCACTTGTTGGCTACCGTTCTACTAGTGAAGAGAAGCTTGTCATCTACAAATATCAAACCAATGGAAGCCTCCTCAATCTCTTGAATGGTAACTATATTTTAGTTAATATAACATTACAATTTTTTCTCTATTTTTTATTTCTTTCAAATGTTGCATTGCATAATAATAACCAACCATCAAACATACTCCTCAATGAAAACAATGAACCACTCATAAGTGAGCATGGCCTAACAAAATTCATGGATCCAAATAGGTCCGGATTCCTTCTTTCCTCTCAGGGATATACCGCGCCAGAAAAATGCATTTCTGAAAAATCTGATGTGTATAGTTTTGGCGTGATCTTGCTCGAGTTATTAACCGGCAAGAGCATAGAGAAAACCCGAATCGATCTCGCGAGATGGGTTCGATCTATGGTAAGGGAAGAATGGACCGGAGAAGTGTTTGATAAAAAAGTTGGGCCAAATGAACATCAATGGGCTTTTCCAATATTGAATGTTGCCCTAACTTGTGTTACAAGGTTCCAAGAAAATAGGCCAACCATGGGAGAGATCTTAGAGAGGATTGAAGAGGTTATGGATGAACAAGAACATCAAGAACAAATTGCTTCTTCAAAATGTTGCTCTAATGGATCCAAAGATTGTTGTTCACTCCACAAAATCATTCCTGATACATGGGATTCACCAGGATCCAATTACTAA 1587 0.3686 MFPISRILCNKNATNIVEIRLENLNLSGTIDADSLCKLQKLRALSLANNNIKGKIPHSILHCTRLMYLNLTRNQLSGNVPTRSLAKLKFLKKLDISNNNFIPIKHNKFSTYYVTPNIKDGTKGSIVNSSPYNDTSNNGKEGSSSPIISMKLLIPLILGLVILLISLIFAAKKLPKLCREGIIKVLIRSHQVSPSSQKSITSDQMVKKGGLEDHSPSLGLVFFVEKEERFTMEDLLRAAADLRSESFCSSLYKVKLNNVENDVHYAVKRLKNVQVSCEDEFGETLRKISKLKHPNILPLVGYRSTSEEKLVIYKYQTNGSLLNLLNGNYILVNITLQFFLYFLFLSNVALHNNNQPSNILLNENNEPLISEHGLTKFMDPNRSGFLLSSQGYTAPEKCISEKSDVYSFGVILLELLTGKSIEKTRIDLARWVRSMVREEWTGEVFDKKVGPNEHQWAFPILNVALTCVTRFQENRPTMGEILERIEEVMDEQEHQEQIASSKCCSNGSKDCCSLHKIIPDTWDSPGSNY* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0364 528 Gene3D Phosphorylase Kinase; domain 1 206 314 - -
Amo07g0364 528 Gene3D Transferase(Phosphotransferase) domain 1 316 509 - -
Amo07g0364 528 Gene3D Ribonuclease Inhibitor 3 117 IPR032675 -
Amo07g0364 528 SUPERFAMILY Protein kinase-like (PK-like) 249 493 IPR011009 -
Amo07g0364 528 Coils Coil 481 501 - -
Amo07g0364 528 Pfam Protein tyrosine and serine/threonine kinase 254 483 IPR001245 GO:0004672|GO:0006468
Amo07g0364 528 PANTHER TYROSINE KINASE FAMILY PROTEIN 6 521 - -
Amo07g0364 528 Pfam Leucine rich repeat 40 100 IPR001611 GO:0005515
Amo07g0364 528 ProSiteProfiles Protein kinase domain profile. 235 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0364 528 SUPERFAMILY L domain-like 12 107 - -
Amo07g0364 528 PANTHER OS05G0588300 PROTEIN 6 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0364 Amo-Chr7 3434222 3437292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0364 7 508 Receptor kinase-like Gene Family AT5G05160 30.912 1.25e-56 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Amo07g0364 PK_Tyr_Ser-Thr 2.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0364 - - gmx:100807491 583.178