Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0316 ATGTCATCCAATAGTTCTTTGAATGTCGAATTGTCGAAGAAGACATCTTTTTTCGGTTTGAAACGATGGGTTTTGATTGGGATCGGAGTCAGTGCCTTTATAGTGCTGATTCTTGGTGTATTGTCTGTATGGGTGATGTTTCGGAGAAAGTCTAGGAGATCTGTTGACAAGTACTCTCAATCCAAGATACCGAATGTGTCGAAAGATATCAGGGTTGACAAGGTTGGGGTGCAGAGTTCTTATGTGGAGCCGGAAAATGTGTCTGTTTCAGTTCATGACAAGGCAAATGATAAGAGTTCAGAGAAGATAACAGTTCATTTGGCCATGAGTAAATCCAGTGATCATGATAATATTAGTCAGTGCAGTTCAAGCTATCACCACGAGAGAGGATTTAGTTCGATGTCTGGGGAAGAAGGAAGTTCCGGGAATGGTAAGAAGCAATCTATGTTGTCATATGGAGGAGGGATGGTGACTGCCTCTCCTTTAGTTGGGTTGCCGGAATTTTCTCATCTCGGGTGGGGCCACTGGTTTACACTCAGAGATCTTCAACTAGCAACGAATCGTTTCTCGCAAGAGAATGTTATCGGTGAGGGTGGCTATGGGGTTGTTTATAGGGGCAGATTGATCAATGGAAGCGAGGTGGCAGTAAAGAAGCTTCTTAACAATTTGGGACAAGCAGAGAAAGAATTCAGGGTTGAAGTCGAGGCGATAGGCCATGTTAGACATAAACATCTCGTGCGCCTGCTTGGATATTGCGTAGAGGGTGTTAACAGGCTGCTAGTGTATGAATATGTGAATAATGGTAACTTAGAGCAATGGCTGCATGGCTCCATGGAACAGGGGACACTAACTTGGGAGGCACGCATCAAAGTTGTGCTCGGCACAGCCAAAGCGCTTGCTTACTTACATGAAGCAATTGAACCAAAAGTTGTTCACCGGGATATAAAGTCTAGCAATATATTGATTGATGACGAGTTCAACGCAAAGGTTTCTGATTTCGGTCTGGCCAAATTATTGGATTCAGGAGAAAGTCACATAACAACTAGAGTTATGGGAACATTTGGATATGTGGCACCAGAATATGCTAATAGTGGCCTCTTAAATGAGAAGAGCGACATTTACAGCTTCGGTGTCCTCCTGCTGGAAGCAGTTACCGGAAGGGACCCTGTAGATATGCTCGGCCGCCTAATGAGGTTAATCTGGTTGAATGGCTCAAGATGA 1221 0.4414 MSSNSSLNVELSKKTSFFGLKRWVLIGIGVSAFIVLILGVLSVWVMFRRKSRRSVDKYSQSKIPNVSKDIRVDKVGVQSSYVEPENVSVSVHDKANDKSSEKITVHLAMSKSSDHDNISQCSSSYHHERGFSSMSGEEGSSGNGKKQSMLSYGGGMVTASPLVGLPEFSHLGWGHWFTLRDLQLATNRFSQENVIGEGGYGVVYRGRLINGSEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVNRLLVYEYVNNGNLEQWLHGSMEQGTLTWEARIKVVLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDMLGRLMRLIWLNGSR* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0316 406 Gene3D Phosphorylase Kinase; domain 1 171 264 - -
Amo07g0316 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Amo07g0316 406 Gene3D Transferase(Phosphotransferase) domain 1 265 403 - -
Amo07g0316 406 ProSiteProfiles Protein kinase domain profile. 189 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0316 406 Pfam Protein kinase domain 190 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0316 406 SMART serkin_6 189 402 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0316 406 MobiDBLite consensus disorder prediction 110 147 - -
Amo07g0316 406 SUPERFAMILY Protein kinase-like (PK-like) 169 394 IPR011009 -
Amo07g0316 406 ProSitePatterns Protein kinases ATP-binding region signature. 195 218 IPR017441 GO:0005524
Amo07g0316 406 Coils Coil 209 229 - -
Amo07g0316 406 PANTHER RECEPTOR-LIKE KINASE PLANT 2 392 - -
Amo07g0316 406 PANTHER OS01G0323000 PROTEIN 2 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0316 Amo-Chr7 2944839 2948515 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0316 5 396 Trihelix Transcription Factor Family AT1G70460 41.266 2.17e-88 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Amo07g0316 Pkinase 3.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0316 - - gmx:100778444 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0705 01 10098549 10101874 Amo07g0316 07 2944839 2948515 PCT
Amo07g0316 07 2944839 2948515 Amo01g0705 01 10098549 10101874 PCT