Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0313 ATGGTAGTAGAGGCTCAAGTTCCTCTACTTGAGTGTGTAATGAACGTTGTGAATGAAGGTTATCCAGGTTCAGTAGTTGATGAACATTGTGAAATGAAGAAGCAGTGGAATCAGAAACTCCAATCTCCCTCAGGGGACAACTTGGTATCATTCATCAAGGGAGTTAGAGATGTGGCAAAGAAAAGATTTGAAGGAAGAAAGTTTAGTAGGAATGGCTGTGTTGATTCACCCCCAACTTTGCTAGATCAATCTGGAACTGGMGGTCTTGATGATGGTTTAGATGATTATCACCAATCACCTCATCAATTCATTGGCAAAGAGGGTCTTCCTAGAAGTTACTGGAGGCCAATTGGTTGGTCTAGGATCTCCGAACTTGTGCAGGCAGTGCGAACRGATGATGGTTGGGCCTCACAGCTGCTTGATTTCACAGATGATGAGATTGATGTTGCTGTTGCTGATGTTGCAACTCCTTACTGGGAAAGGCCTGTTGGTCCAACATGGTGGTGTCATTTGGATGCAAGCCATCCATTTGTTGTTACATGGTTGGGTAATTCTCATTGGTTACATCCTGCTATTAGCATAGCTTTGAAAGATGAAAGTAGATTAATAAGTGAACGAATGAAGCACCTTTTATATGAGGTTCCAGTCCGAGTCGCTGGCGGTCTGCTATTTGAACTTCTGGGGCAGTCAGCTGGTGATCCTTTAGCAGAGGAAGATGACATACCTGTTGTACTACGATCATGGCAGGCGCAAAACTTTTTAGTTACAGCCATGCATGTAAAGGGTTCTGCATCAAACATAAATGTATTAGGCATTCTTGAAGTTCAGGAGCTGCTGGCTGCTGGAGGTGCTAACATTCCGCGCACCATTCATGAAGTTGTAGCGCACTTAGCTTGCCATCTTGCACGATGGGACGATAGGAGAAACCATGAGGATTTACATCTATTCACAATAATATTGAACCAGGAAATTAGAAGATTATCGACCCAGGTTATAAGAGTGAAATGGTCGCTCCACGCGCGAGAGGAAATTGTTTTTGAACTTCTTCAACAGTTGAGAGGGAATACAACAAGAGCCTTGCTGGAAGGAGTAAGAAAGAGTACTAGGCAAATGATTGAGGAGCAAGAAGCAGTTCGAGGACGGTTGTTCACCATACAAGATGTCCTGCAAAGCACAGTCCGTGCATGGTTGCAGGATAAAAGCCTCACGGTTACACATAACCTTGGAATATTTGGGGGTTGTGGCCTTGTTCTTTCCATCATCACTGGACTATTTGGTATAAACGTTGACGGAATACCTGGAGCCGAAGGAGCTCCTTATGCGTTTGGCCTATTCTCTGCCGTCTTGTTTGTGTTGGGAGCTATACTTATTGGAATCGGATTGGTTTATCTCGGTTTGAAGAAACCCATAATGCAAGAAAATGTTGCAGTGAGAAAGCTGGAGCTTGAAGAGCTGGTCAGGATGTTTCAACATGAAGCAGAAACTCATGCTCAAGTGCGAAAAACGGGTCCTCGTATGGATGTTCCACCAACTGCAGAAGTTAGGGGAGCACCAAGTGGTGCAAATAATCGCTCTGAGAAGAAGCACATTCACCACCAAGCACAAACATCACACCATGAACTGTGTCTCCATGATCATGTTCTTGCTGCTCCATCACTGAGCCAATCCACATCTCCTTATATAAACCTCTTAGAAAACTTGAGCATCTCAAAAAGGATGACTGCACATGTCTCACGTTCTGCACCGGCCGTACTATTCACTGACACTGGCATAGACTTTCATGAGCCCTCTGAACCTAGACCTATACAAAATTCATCAACCTTAATGGTAAGGGTATCTTTCATCTCTGTATTCTTGTATTTGGCAATTGGTGTTGCAGTGTACATGATAAATGGGAGRTTCAAGGGTACCACCACACTTAAGCTTATAGATGCTATTTACTTCACAGTAGTTCTAAGCACAATTGGATTTGGAGATATTGTTCCTGATGCAACATCTACCAAGATCTTTACCTGTGGTTTCATTTTGGTTGGTTTTGGACTTACTGGTTTTCTCCTCAGCGGCTTGGTTGAATACATCTGTGATACTCAAGAAGCATTCACYTTGAGCATGATGGATGAGAATAGATATAAGAGAATTCTCTGGACTTACATAGTTGATGAAGAGAAAGGAAGAATGCGAATTCGGACAAAAGTTTCTTTAGCTTTGGTMGTTGTCATRGMCTGCATCGCAACAGGAGCAGTCACAGCTCACTTTCTAGAGGGTATGGATTGGATAGACAGTTTCTATCTCTCCATTACGTCTGTTACGACAGTTGGTTATGGCGATTATGCTTTCAAAACTGTAACTGGAAGATGCTTCGCGATTATCTGGCTTTTGGTAAGTACATTGGCAGTTGCTAGGGCCTTTCTGTACCTAACTGATTATAGCATGCACAAGAGGAAACGTAAGGTGGCGAAATTGGTTCTTCATAAGAAGATAACTATGTCAGATTTAGTAGCTGCAGACCTTGATAATGATGGATCAATAAGCAAGTCCGAATTTCTTATCTACAAGCTCAAGCAAATGGGAAAAATAACTGAGACTGACATTCTGCAAATAAGCAAACAATTTGATTCCTTGGATTGTGGCATCTATGGCAAGATTAGTGTTGCTGACCTTATGGTAAATGTCTAA 2676 0.4249 MVVEAQVPLLECVMNVVNEGYPGSVVDEHCEMKKQWNQKLQSPSGDNLVSFIKGVRDVAKKRFEGRKFSRNGCVDSPPTLLDQSGTGGLDDGLDDYHQSPHQFIGKEGLPRSYWRPIGWSRISELVQAVRTDDGWASQLLDFTDDEIDVAVADVATPYWERPVGPTWWCHLDASHPFVVTWLGNSHWLHPAISIALKDESRLISERMKHLLYEVPVRVAGGLLFELLGQSAGDPLAEEDDIPVVLRSWQAQNFLVTAMHVKGSASNINVLGILEVQELLAAGGANIPRTIHEVVAHLACHLARWDDRRNHEDLHLFTIILNQEIRRLSTQVIRVKWSLHAREEIVFELLQQLRGNTTRALLEGVRKSTRQMIEEQEAVRGRLFTIQDVLQSTVRAWLQDKSLTVTHNLGIFGGCGLVLSIITGLFGINVDGIPGAEGAPYAFGLFSAVLFVLGAILIGIGLVYLGLKKPIMQENVAVRKLELEELVRMFQHEAETHAQVRKTGPRMDVPPTAEVRGAPSGANNRSEKKHIHHQAQTSHHELCLHDHVLAAPSLSQSTSPYINLLENLSISKRMTAHVSRSAPAVLFTDTGIDFHEPSEPRPIQNSSTLMVRVSFISVFLYLAIGVAVYMINGRFKGTTTLKLIDAIYFTVVLSTIGFGDIVPDATSTKIFTCGFILVGFGLTGFLLSGLVEYICDTQEAFTLSMMDENRYKRILWTYIVDEEKGRMRIRTKVSLALVVVXXCIATGAVTAHFLEGMDWIDSFYLSITSVTTVGYGDYAFKTVTGRCFAIIWLLVSTLAVARAFLYLTDYSMHKRKRKVAKLVLHKKITMSDLVAADLDNDGSISKSEFLIYKLKQMGKITETDILQISKQFDSLDCGIYGKISVADLMVNV* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0313 891 ProSitePatterns EF-hand calcium-binding domain. 836 848 IPR018247 -
Amo07g0313 891 SUPERFAMILY Voltage-gated potassium channels 607 693 - -
Amo07g0313 891 PANTHER MAGNESIUM TRANSPORTER CORA FAMILY PROTEIN 69 524 - -
Amo07g0313 891 SUPERFAMILY Voltage-gated potassium channels 706 826 - -
Amo07g0313 891 Pfam CorA-like Mg2+ transporter protein 322 457 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo07g0313 891 Pfam Ion channel 740 809 IPR013099 -
Amo07g0313 891 Pfam Ion channel 616 693 IPR013099 -
Amo07g0313 891 Gene3D - 599 714 - -
Amo07g0313 891 Gene3D - 719 832 - -
Amo07g0313 891 PRINTS Two pore domain K+ channel signature 770 779 IPR003280 GO:0005267|GO:0016020|GO:0071805
Amo07g0313 891 PRINTS Two pore domain K+ channel signature 650 678 IPR003280 GO:0005267|GO:0016020|GO:0071805
Amo07g0313 891 MobiDBLite consensus disorder prediction 496 535 - -
Amo07g0313 891 PANTHER MAGNESIUM TRANSPORTER CORA-LIKE FAMILY PROTEIN 69 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0313 Amo-Chr7 2902120 2907563 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0313 576 888 Ion Channels AT4G18160 50.000 2.04e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0313 - - adu:107496492 1004.2