Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0311 ATGTTTGGTGAAATGGATAGAAAGCAAGAACAAGAAAAAGGTAACCTGAATAATAATAATAATAACAATAATAATAATAATAATAATAAGTCTGGCATTGATGTTACTCTAATATCTGCCACCACCAAAGTTCCAAAAGCAGTTTCACCGGTTTCCTCTGCTGCTGAGGGGGAAGCCTTAAGGCGGCCGCGTGGCAGGCCTGCCGGCTCCAAGAACAAGCCGAAGCCACCAATAATTGTGACAAGGGACAGTGCTAATGCACTCAAAGCTCATGCTATGGAAGTAAGCTCTGGCTGTGATGTGAATGAGAGCTTGTTGAACTTTGCAAGGAGGAAGCAGAGAGGCCTCTGCATACTAAGTGGAACTGGCTGTGTGACAAATGTAACTCTGCGCCAACCGGCCTCATCCGGCGCCATTGTGACTCTTCACGGCCGATTCGAGATCCTCTCATTGCTGGGGTCAATCCTTCCCCCACCAGCACCACCAGGAATCACTGGCCTCACCATTTACTTGGCTGGTGCTCAGGGGCAAGTTGTAGGAGGTGCTGTTGTTGGTGCCTTGATTGCTTCAGGACCTGTTGTGATCATGGCTGCATCATTCATGCATGCTACCTTCGATCGCCTGCCATTGGAAGATGAAGAACTCACGGCTGCAATGCAGAATCAGCATTACCAAAACGGACGCACCACGCATCATCTCGATATCTCAGACTTGTATGCAATGCCACAGAACCTTCTCACCAATGGAACAATGGCACCAGAGATATATTCTTGGGCACCAGGGAGGAACTTGTCAAAAAGCTGA 804 0.4789 MFGEMDRKQEQEKGNLNNNNNNNNNNNNNKSGIDVTLISATTKVPKAVSPVSSAAEGEALRRPRGRPAGSKNKPKPPIIVTRDSANALKAHAMEVSSGCDVNESLLNFARRKQRGLCILSGTGCVTNVTLRQPASSGAIVTLHGRFEILSLLGSILPPPAPPGITGLTIYLAGAQGQVVGGAVVGALIASGPVVIMAASFMHATFDRLPLEDEELTAAMQNQHYQNGRTTHHLDISDLYAMPQNLLTNGTMAPEIYSWAPGRNLSKS* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0311 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 20 266 - -
Amo07g0311 267 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 20 266 IPR014476 GO:0003680
Amo07g0311 267 Gene3D - 87 232 - -
Amo07g0311 267 MobiDBLite consensus disorder prediction 1 32 - -
Amo07g0311 267 MobiDBLite consensus disorder prediction 14 32 - -
Amo07g0311 267 Pfam Plants and Prokaryotes Conserved (PCC) domain 90 200 IPR005175 -
Amo07g0311 267 MobiDBLite consensus disorder prediction 45 78 - -
Amo07g0311 267 PIRSF ESCAROLA 2 263 IPR014476 GO:0003680
Amo07g0311 267 ProSiteProfiles PPC domain profile profile. 85 223 IPR005175 -
Amo07g0311 267 CDD DUF296 91 171 IPR005175 -
Amo07g0311 267 SUPERFAMILY AF0104/ALDC/Ptd012-like 85 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0311 Amo-Chr7 2893723 2894526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0311 5 266 AT-hook Motif Nuclear Localized (AHL) Family AT2G42940 65.909 7.49e-106 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0311 - - vra:106765118 401.364