Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0302 ATGCAGCAAGATCAAAGAAAAAAGAGTTCAATGGAGATGGAGTTTTTCTCTGATTATGGGGATGCCAGCCGGTACAAAATTCAAGAAGTCATCGGGAAAGGAAGTTATGGTGTTGTATGTTCAGCTATTGACACTCATACCGGTGAAAAAGTTGCAATAAAAAAGATTCATGATATATTTGAGCATATATCCGATGCTGCACGCATTCTCCGGGAGATAAAGTTGCTTAGACTTCTTCGACATCCTGATATTGTTGAAATCAAACATGTCATGATGCCTCCTTCTAGGAGGGAATTTAAGGACATTTATGTTGTTTTCGAGCTCATGGAGTCGGATCTACATCAAGTCATTAAAGCCAATGATGACTTGACAAAGGAGCACTATCAATTTTTCCTTTACCAGTTACTTCGAGCATTGAAGTATATTCACACCGCAAATGTCTATCATCGAGACTTGAAGCCAAAGAATATACTGGCCAATGCAAACTGTAAACTTAAAATCTGTGATTTTGGGTTAGCAAGAGTCGCTTTCACCGACACACCAACAACAGTATTTTGGACGGATTACGTTGCGACAAGGTGGTATAGAGCACCGGAGCTTTGTGGATCGTTTTACTCAAAGTATACTCCAGCAATCGACATATGGAGTATAGGTTGCATCTTCGCAGAAGTATTATTAGGAAAGCCACTTTTCCCTGGAAAAAATGTTGTCCATCAGTTGGATCTGATGACCGATCTGCTTGGAACTCCTTCGCTGGATACTATATCCCGAGTACGCAATGATAAGGCTAGGAGATACCTAACTAGTATGCGGAAGAAGCAGCCTGTGCCATTTGCACAGAAGTTTCCTAATGCAGATCCTTTAGCATTACGACTACTTGAAAGATTACTTGCCTTTGACCCGAAAGACAGGCCTACTGCTCAAGAGGCATTAGCTGATCCTTACTTCAAGGGATTAGCAAAGGTGGAGAGGGAACCATCCTGTCATCCTATCACGAAAATGGAGTTTGAATTTGAAAGGCGAAGAGTCACAAAGGAAGAAATCCGAGAGCTAATTTTTCGTGAGATTTTAGAGTACCATCCCCAACTTTTGAAAGACTACATAAATGGAACGGAGAGGGCTAATTTCCTTTATCCAAGTGCTGTTGATCAATTCAAAAAGCAGTTTGCTCATCTTGAGGAAAATGGTGGCAAAAGTAGTCCAGTTATGCCACTTGAACGAAAACATGTATCGCTTCCAAGGTCAACGGTTGTTCATTCGAATATGGTAGCCCAAAAAGAGCAATCAAACAATGCTTCGAGCAAAAACCGGCAACCGGCCGAGGAATATAATAACAATCAAAGAATTCCACCAGCAAAACCCGGGAAAGTAGTTGGTCCCGTTGTCCCGTATGAGTATGGTAGTATCGTCAAGGACTCTTTCGATCCGAGGACATTCATCAGAGGTTCTTTTGTTCCTTCTCAAACCGTTCCTGCCACGTACTATTACCAAAGATCAACCACCGGACACCAAGACGCCGAAAAGGGGGTGCCTTTGAAACCAAAACATGGCCCTCAGCAATGTGGAGTGAATGCGAAAATAGCACCAGACATAGCCATCAACATTGATACTAACCCTTTTTTCATGACAAGGGCAATAGGAGTGAACAAGATAGAACAAGATGATAATAATAATAACCATAGAATAGCCATTGACACAAACTTGCTTCAATCAAAAGCTCATCAATATGGCGGCATTGGTGCTGCGGCCACGGCCACAACCGGTGCCACTGCTCATAGAAAGGTTGGACCTGTTCAGTATGGCATGACAAGGATGTTCTAA 1821 0.4223 MQQDQRKKSSMEMEFFSDYGDASRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHVMMPPSRREFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFTDTPTTVFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLLGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNDKARRYLTSMRKKQPVPFAQKFPNADPLALRLLERLLAFDPKDRPTAQEALADPYFKGLAKVEREPSCHPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYINGTERANFLYPSAVDQFKKQFAHLEENGGKSSPVMPLERKHVSLPRSTVVHSNMVAQKEQSNNASSKNRQPAEEYNNNQRIPPAKPGKVVGPVVPYEYGSIVKDSFDPRTFIRGSFVPSQTVPATYYYQRSTTGHQDAEKGVPLKPKHGPQQCGVNAKIAPDIAINIDTNPFFMTRAIGVNKIEQDDNNNNHRIAIDTNLLQSKAHQYGGIGAAATATTGATAHRKVGPVQYGMTRMF* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0302 606 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0302 606 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Amo07g0302 606 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Amo07g0302 606 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 476 - -
Amo07g0302 606 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0302 606 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Amo07g0302 606 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Amo07g0302 606 MobiDBLite consensus disorder prediction 422 445 - -
Amo07g0302 606 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 476 - -
Amo07g0302 606 MobiDBLite consensus disorder prediction 422 456 - -
Amo07g0302 606 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Amo07g0302 606 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0302 606 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0302 Amo-Chr7 2788687 2794231 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0302 1 436 MAP Kinase Gene Family AT2G42880 88.383 0.0 805
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Amo07g0302 Pkinase 1.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0302 - - gmx:100815293 1014.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0735 01 10321602 10326908 Amo07g0302 07 2788687 2794231 PCT
Amo07g0302 07 2788687 2794231 Amo01g0735 01 10321602 10326908 PCT