Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0289 ATGGAAACCAAGAAGCTTCAGCGCCGTTTCTCACTCGGCAGACAATCCTCCATGGCGCCGGACCGCTCCTCCAAAGACGGCGGCGATGACTTCGGCTCCGAGGCAGTTGACGAATCCGTGCGGCTGATGTACCTTGCCAACGAAGGTGACTTGGAAGGGATTAAGGAGCTGTTAGATTTCGGCAGTGACGTCAACTTCAGGGACATTGACGGCCGCACCGCCCTCCACGTCGCCGCCTGCCAGCGCCGCACCGACGTCGTTGACTTGTTGCTACAAAATGGAGCTGAGGTTGACCCCAGGGACCGCTGGGGCAGCACGCCTTTAGCTGATGCAATGTACTATAAAAATCATGATGTTGTAAAGCTTTTGGAGAAACATGGTGCAAAACCCCCGGTTGCTCCTATGCATGTCCAAAATGCTCGTGAAGTCCCCGAATATGAGATTGATCCTAAAGAACTTGATTTTACAAATAGTGTTGGGATAACCAAGGGAACTTTCCGTATTGCATTGTGGCGTGGAATTAAGGTTGCTGTCAAAACTCTTGAGGAGGAAGTGTTCACTGATGATGATAAAGTGAAGGCATTTCACGATGAGCTTGCGTTACTTCAGAAAGTTCGGCATCCAAATGTAGTTCAGTTTTTAGGTGCTGTAACACAAAGCACCCCGATGATAATTGTCACGGAATATTTGCCACAGGGAGATCTTCGCACTTACTTGAAGCGGAAAGGTGCATTTAAACCAGGAATAGCTGTAAAATTTGCACTTGATATAGCTAGGGGAATGAATTATTTGCATGAACATAAACCAGAAGCCATTATACACCGAGATCTTGAACCTCCAAATATTCTTCGGGATGATTCTGGGCATCTGAAAGTTGCTGACTTTGGAGTCAGCAAGTTGCTGAAATTTGCAAAAACAGTCAAAGAAGACAAACCAGTGACAAGCCAGGATACGTCATGGCGCTATGTTGCTCCAGAGGTTTACAAGAATGAGGAATATGACACTAAAGTAGATGTGTTTTCATTTGCTCTAATACTACAGGAGATGATTGAAGGTTATCCACCATTTTATGCAAAGTCAGAAAATGAAGTTCCTAAAGCATATGTTGAAAATGAACGTCCGCCATTTAAAGCTTCACCCCAGCTTTATGCTTATGGACTTAGGCAGTTAATAGAGGAATGTTGGGATGAAAAACCTTACAGAAGACCAACATTTAGCCAAATAATTGGGAGATTAGAAGACATCAACTACCATCATGATCAAAAGAAGCGTTGGAAGGTTCAGACTCCTACATGCATTCAGCGTCTGGAGGCCCTGTTTAGAGGGTATCGCACAAGCCCGAATAGCCGATCATCTCGCTCTACGCCAAGATAA 1374 0.4534 METKKLQRRFSLGRQSSMAPDRSSKDGGDDFGSEAVDESVRLMYLANEGDLEGIKELLDFGSDVNFRDIDGRTALHVAACQRRTDVVDLLLQNGAEVDPRDRWGSTPLADAMYYKNHDVVKLLEKHGAKPPVAPMHVQNAREVPEYEIDPKELDFTNSVGITKGTFRIALWRGIKVAVKTLEEEVFTDDDKVKAFHDELALLQKVRHPNVVQFLGAVTQSTPMIIVTEYLPQGDLRTYLKRKGAFKPGIAVKFALDIARGMNYLHEHKPEAIIHRDLEPPNILRDDSGHLKVADFGVSKLLKFAKTVKEDKPVTSQDTSWRYVAPEVYKNEEYDTKVDVFSFALILQEMIEGYPPFYAKSENEVPKAYVENERPPFKASPQLYAYGLRQLIEECWDEKPYRRPTFSQIIGRLEDINYHHDQKKRWKVQTPTCIQRLEALFRGYRTSPNSRSSRSTPR* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0289 457 Gene3D Phosphorylase Kinase; domain 1 146 230 - -
Amo07g0289 457 PRINTS Tyrosine kinase catalytic domain signature 227 240 IPR001245 GO:0004672|GO:0006468
Amo07g0289 457 PRINTS Tyrosine kinase catalytic domain signature 266 284 IPR001245 GO:0004672|GO:0006468
Amo07g0289 457 PRINTS Tyrosine kinase catalytic domain signature 337 359 IPR001245 GO:0004672|GO:0006468
Amo07g0289 457 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Amo07g0289 457 MobiDBLite consensus disorder prediction 1 32 - -
Amo07g0289 457 SMART ANK_2a 70 99 IPR002110 GO:0005515
Amo07g0289 457 SMART ANK_2a 37 66 IPR002110 GO:0005515
Amo07g0289 457 SMART ANK_2a 103 132 IPR002110 GO:0005515
Amo07g0289 457 SUPERFAMILY Ankyrin repeat 41 132 IPR036770 -
Amo07g0289 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 440 - -
Amo07g0289 457 Pfam Protein tyrosine and serine/threonine kinase 172 411 IPR001245 GO:0004672|GO:0006468
Amo07g0289 457 Gene3D Transferase(Phosphotransferase) domain 1 231 451 - -
Amo07g0289 457 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Amo07g0289 457 Gene3D - 3 145 IPR036770 -
Amo07g0289 457 Pfam Ankyrin repeats (3 copies) 42 130 IPR002110 GO:0005515
Amo07g0289 457 ProSiteProfiles Protein kinase domain profile. 148 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0289 457 PIRSF ILK 2 436 - -
Amo07g0289 457 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 440 - -
Amo07g0289 457 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Amo07g0289 457 SUPERFAMILY Protein kinase-like (PK-like) 171 432 IPR011009 -
Amo07g0289 457 CDD STKc_MAP3K-like 169 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0289 Amo-Chr7 2616080 2620441 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0289 1 427 MAP Kinase Kinase Kinase AT4G18950 66.204 0.0 579
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Amo07g0289 PK_Tyr_Ser-Thr 3.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0289 - - gmx:100795964 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo07g0289 07 2616080 2620441 Amo17g3009 17 133134428 133142024 PCT