Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0284 ATGGAGAATAATTTAGACCATTGCTGTTGTTCCAAGCTCCTTCTTTTTCTTCTCCTTGGTTCAACTTCATTGGTTTTCTTGTCACATTTGGCTTCTGCTGCCACACCAAAACTCAACAATGAAGAGGTGAAGGCATTGAAAGAGATAGGGAAGAAGTTAGGGAAGAAGGATTGGGACTTTGGTGTTGATCCTTGCAGTGGAAAAGGGAATTGGAACATGTCTGATAAGAAGAGCTTTCAGAGCTTTGTGGCTTGTGATTGCTTTTCCTTCAATCAATCTTCTTGCCATCTTTATTCTGTTAACATAATATACTTGAAGGCAGAGAATCTGAGTGGTACTCTTTCACCAGAGTTTTCCAAGCTCCATTATCTCAAGATTTTGGACCTTAGTCGCAACCTCATCACTGGTTCTATACCTCAACAATGGGCTTCCATGAACTTAGTTGAGCTCTCTTTAATGGGAAACAAATTATCAGGTCCATTCCCCAAGGTTCTCACAAATATTACAACTCTCAAAAACATAAGTATTGAGGGAAATTACTTTACAGGCCCCATCCCAAATGAGATTGGACAGTTGATCAATCTAGAAAAGATCATTCTGTCATCAAATGGATTCACTGGAACATTGCCAGCATCACTCTCCAAGTTAACCAAGTTGAATGATCTGAGGCTAAGCGATAATAGTTTCTCCGGGAGGATACCGGATTTCATTAGTAATTGGACATCAATCGAAAAGCTGCACATGCAGGGTTGTTCTCTTGAGGGGCCTATACCTTCTAGCATATCTGCATTGACAAGATTGAGTGATTTGAGGATAAGTGACCTAAAAGGTACTAAAGGCTCTTCTTTCCCACCACTGAGTAATATGAAATCCATGAAGACACTGGTACTGAGAAAATGCTTGATCAAAGGAAATATCCCTGATTATATAGGAAGAATGGAAAAACTGAAAATGTTAGATTTGAGTTTCAATGGCTTGAGTGGGAAGATACCTGAATCTTTTTCCATCCTTGACAAACTTGACTACATGTTTTTAACTGGGAACATGCTATCAGGGACCATAGCAAGCTGGATCCTTAGAACTAGTAAAAATGTGGATATCTCTTCGAATAACTTCAACTGGGATAGCTCTAGTCCAACTGAATGTCAAAGAGGAGGGACCTTAAACCTTGTTGAGGGATACTCCTCATCCGCAGATACACATAAACATGATTGCATGATCCAAGAAATCCTAATTGCCATTGTTCATGCAACAGATTCTCACTCCATGAACATAAACTGTGGTGGACTGGAAGCAAATGTCAGCGGCCGTGTTTATGAAGCCGACAGAGAAGGAAGAGGTGCATCAATATTGTATTACCCTACTCAGGGATGGGCTCTAAGCAGCACTGGAAGCTTCATGGACAATGACATTGACTCTGATCCCTTTATTGTGACTAATGCTTCAAGACTTGTAAATGTCTCTGCACTCAATTCAGAACTTTACACTACAGCTCGTGTTTCGCCCCTTGCTCTGACATACTATGGCCTATGCCTTATCAATGGAAACTACACTGTTGAGCTTCACTTTGCAGAGATTATGTTTATCAATGACAGGTCATTTTACAGTCTCGGAAGGCGAATTTTTGATGTGTACATCCAGGGGAAATTGGTGTTGAAAGAATTTGATATCCAAAAAGCAGCTGGTGGTACTGGCAAGCCAATTGTGAAGACATTTAATGCAACTGTCACAGAACATACATTGAAAATTCACTTCTACTGGGCTGGAAAGGGCACAACCGGCATACCGACTCGAGGAGTTTATGGACCTCTAGTATCTGCTATCTCAGTAGAGCCTAATTTCCCAGTACCATCAGAAAATGGCCACAAAACCTACATCATTCTGCTAGCTGCTTGTACAGTTGCTGCTGTTGGTGTACTTGTTCTTATTTTGTTGGGTGTAATGAGGAGAAAGGGATATATAGGAGGAAGCAATGCAGTGTATAAAGAACTTAGGGGTATAGATCTGCAGACAGGATTGTTTACTTTAAAACAAATCAAAGCAGCAACTAAAAACTTTGATGTAGCTAATAAAATTGGTGAAGGTGGCTTTGGTTCTGTTTACAAGGGGCTACTATTAGATGGAACTGTAATTGCAGTAAAGCAACTCTCATCAAAATCAAAGCAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCAGGGCTTCAACATCCAAATCTGGTTAAGCTTTATGGATGTTGTGCTGAGGGTAAGGATCTAGACAGAAAAGTGAAACTGGACTGGCCAACCAGGAAGAAGATTTGTCTTGGTATAGCTAGAGCTTTAGCTTATCTCCATGAAGAGTCCAGAATCAAGATCATTCATAGGGATATAAAGACTAGTAATGTCTTACTAGACAAGGATTTCAATGCCAAAGTTTCGGATTTTGGTTTGGCTAAACTCAATGAAGATGACAAAAGTCATGTTAGCACTCGAATTGCAGGAACAATTGGTTATATGGCTCCTGAGTATGCAATGCGTGGCTATTTAACTGACAAAGCAGATGTGTATAGCTTTGGGGTGGTTGCATTGGAAATCGTTAGCGGAAAGAGCAACACAAATTACAGACCTAATGAGGAATTTGTTTATCTTCTTGATTGGGCATATGTCTTGCAAGAAAGAGGAAATCTTCTAGAGCTTGTTGATCCAGATTTGGGGTCAGAATATTCAACAAAAGAGGCAATGGTAATGCTAAATGTGGCTCTACTATGTACTAATGCATCTCCAACACTAAGACCAACAATGTCACAAGCAGTGAGCATGCTTGAAGGTTGGACAGACATTCAAGATATACTTTCTGATCCTGGATATTCAGCATATAGTTCAAATTCAAGATATAAGAGTATGAGGAATCACTTCTGGCAGAATCCAAGTAGATCACAAAGCATGTCAACATATAGTAGTACTATGTATGCTGATGCTAATTCCTCTCACTCACTTATTGAAACAGAAGGGAGTTACCATCTTCAAAGTAATACACGTCCAAAAACAAGGAATTATGTTCTCCCTACATTTTCTATGTATAACCTTTTGGTCATGACACTCATCCAAACTGGGGTTCTAAACTACATCCCTGATCCAGCGAGCCGCCGCTTTGAGGCATTCGACATGGCTACCTGGCCAAGCTTGTCACCATCACTTGATACAATCCTTTCGTTGATCGGATTATAA 3216 0.4011 MENNLDHCCCSKLLLFLLLGSTSLVFLSHLASAATPKLNNEEVKALKEIGKKLGKKDWDFGVDPCSGKGNWNMSDKKSFQSFVACDCFSFNQSSCHLYSVNIIYLKAENLSGTLSPEFSKLHYLKILDLSRNLITGSIPQQWASMNLVELSLMGNKLSGPFPKVLTNITTLKNISIEGNYFTGPIPNEIGQLINLEKIILSSNGFTGTLPASLSKLTKLNDLRLSDNSFSGRIPDFISNWTSIEKLHMQGCSLEGPIPSSISALTRLSDLRISDLKGTKGSSFPPLSNMKSMKTLVLRKCLIKGNIPDYIGRMEKLKMLDLSFNGLSGKIPESFSILDKLDYMFLTGNMLSGTIASWILRTSKNVDISSNNFNWDSSSPTECQRGGTLNLVEGYSSSADTHKHDCMIQEILIAIVHATDSHSMNINCGGLEANVSGRVYEADREGRGASILYYPTQGWALSSTGSFMDNDIDSDPFIVTNASRLVNVSALNSELYTTARVSPLALTYYGLCLINGNYTVELHFAEIMFINDRSFYSLGRRIFDVYIQGKLVLKEFDIQKAAGGTGKPIVKTFNATVTEHTLKIHFYWAGKGTTGIPTRGVYGPLVSAISVEPNFPVPSENGHKTYIILLAACTVAAVGVLVLILLGVMRRKGYIGGSNAVYKELRGIDLQTGLFTLKQIKAATKNFDVANKIGEGGFGSVYKGLLLDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCAEGKDLDRKVKLDWPTRKKICLGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEDDKSHVSTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPNEEFVYLLDWAYVLQERGNLLELVDPDLGSEYSTKEAMVMLNVALLCTNASPTLRPTMSQAVSMLEGWTDIQDILSDPGYSAYSSNSRYKSMRNHFWQNPSRSQSMSTYSSTMYADANSSHSLIETEGSYHLQSNTRPKTRNYVLPTFSMYNLLVMTLIQTGVLNYIPDPASRRFEAFDMATWPSLSPSLDTILSLIGL* 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0284 1071 SMART serkin_6 686 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0284 1071 Gene3D - 418 612 - -
Amo07g0284 1071 ProSiteProfiles Protein kinase domain profile. 686 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0284 1071 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Amo07g0284 1071 Gene3D Phosphorylase Kinase; domain 1 657 753 - -
Amo07g0284 1071 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 410 980 - -
Amo07g0284 1071 Pfam Malectin domain 423 608 IPR021720 -
Amo07g0284 1071 SUPERFAMILY Protein kinase-like (PK-like) 670 974 IPR011009 -
Amo07g0284 1071 Pfam Protein kinase domain 687 935 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0284 1071 Gene3D Transferase(Phosphotransferase) domain 1 754 949 - -
Amo07g0284 1071 ProSitePatterns Protein kinases ATP-binding region signature. 692 714 IPR017441 GO:0005524
Amo07g0284 1071 CDD STKc_IRAK 692 939 - -
Amo07g0284 1071 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Amo07g0284 1071 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 93 302 - -
Amo07g0284 1071 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 303 360 - -
Amo07g0284 1071 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 410 980 - -
Amo07g0284 1071 Gene3D Ribonuclease Inhibitor 239 383 IPR032675 -
Amo07g0284 1071 SUPERFAMILY L domain-like 92 354 - -
Amo07g0284 1071 Gene3D Ribonuclease Inhibitor 55 170 IPR032675 -
Amo07g0284 1071 Gene3D Ribonuclease Inhibitor 171 238 IPR032675 -
Amo07g0284 1071 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 93 302 - -
Amo07g0284 1071 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 303 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0284 Amo-Chr7 2578063 2585503 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0284 222 999 Receptor kinase-like Gene Family AT1G07650 62.701 0.0 947
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo07g0284 Pkinase 7.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0284 - - gmx:100305357 1504.58