Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0283 ATGGACGCCGCCCAGATCCATGACCCTGGCAAGATGCACGTCTGGCTTCGAACTTTCGAAACTGCAGAGGGGGCAGCGCGTGCGTATGGCGCCAAGGCTAAGACCAATTTTCAGATGGCGGCGGAGCTTCTGAACAACAGCAACAACTTCGTTCACATTAACAACAACACATGTAACCCGAGCCAGAGTAGCACGCTTAATTCATCTTCGCAGCTGCCGTTTTCTCCGCCTTTACTTCTGACGTCATGGCGTTCCCAGCAGCGTGTCGTATCATGTTTTTTGAAATGTTACATCGTGCGACGGATCGAGAATGAGCCGCCAGCGAAATGTGTCTCATAG 339 0.5192 MDAAQIHDPGKMHVWLRTFETAEGAARAYGAKAKTNFQMAAELLNNSNNFVHINNNTCNPSQSSTLNSSSQLPFSPPLLLTSWRSQQRVVSCFLKCYIVRRIENEPPAKCVS* 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0283 112 Gene3D AP2/ERF domain 3 45 IPR036955 GO:0003700|GO:0006355
Amo07g0283 112 ProSiteProfiles AP2/ERF domain profile. 1 47 IPR001471 GO:0003700|GO:0006355
Amo07g0283 112 SUPERFAMILY DNA-binding domain 4 38 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0283 Amo-Chr7 2569853 2570191 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0283 3 80 AP2-EREBP Transcription Factor Family AT3G15210 47.191 9.82e-12 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0283 K09286 - cit:102614391 55.4546