Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0278 ATGAAGCGCAGCCATCGGTTCAGCCGCATTGCTGCCACCGTGGTTTATAATGAGTACATCAATGACAGGCATCATGTTCATATGAACTCCACTCAGTGGGCAACTCTTACAGAGTTTGTCAAGTACTTGGGTCGAACGGGGAAGTGTAAGGTCGAGGAAACACCTAAGGGTTGGTTCATTACGTATATAGATAGAGATTCTGAGACCCTTTTCAAGGAGAGGTTGAAGAATAAGAGGATCAAGGCAGATATGGTGGAGGAAGAGAAGCAAGAGAAGGAGATTATGAAACAGATCGAAAAAGCTGAGCAATTGATGCAACGGTCAGATACCACTGAGGCTGATCAGGCTTCAAGGGTCGAGGCTCCAAAGGAACTAAATGTGGAAGATGGAGTTAAGATAGGATTTTCTCTTGGCGCATCGGCTAAGCCTGTGATCAAAGAGAAACACGAGTCATCGAAGAAGGTTGTGTTTGATGAGGATGAGGAAGATAAATACAAGGAAAGGAATCCAGGAAATAGTTTGAAGAGAAAAGAGAGTGGAGGTGGAGGAAAGTCAACCTTGGAAGAATTGATTAGGGAAGAGGAGAAGAAAAAGGAGAAAATCAACAGGAAGGACTATTGGTTGCATGAGGGAATCATTGTTAAGGTTATGAGCAAGGCCTTGGCAGAGAAGGGGTACTACAAGCAAAAGGGTGTGGTGAGAAAGGTGATTGACAAATATGTTGGGGAAATTGAAATGCTTGAAAGCAAGCATGTGCTGAGAGTCGATCAGGAAGAGCTTGAAACTGTGATTCCACAAGTTGGGGGCCGTGTAAAAATTGTCAATGGTGCATATCGTGGATCAACTGCGAAACTTTTGGGGGTGGATACGGATCATTTTTGCGCAAAGGTGCAGATAGAGAAAGGTGCCTATGATGGCAGGGTACTCAAAGCGGTGGAATATGAGGACATTTGTAAAATAGCACAATGA 969 0.4407 MKRSHRFSRIAATVVYNEYINDRHHVHMNSTQWATLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERLKNKRIKADMVEEEKQEKEIMKQIEKAEQLMQRSDTTEADQASRVEAPKELNVEDGVKIGFSLGASAKPVIKEKHESSKKVVFDEDEEDKYKERNPGNSLKRKESGGGGKSTLEELIREEEKKKEKINRKDYWLHEGIIVKVMSKALAEKGYYKQKGVVRKVIDKYVGEIEMLESKHVLRVDQEELETVIPQVGGRVKIVNGAYRGSTAKLLGVDTDHFCAKVQIEKGAYDGRVLKAVEYEDICKIAQ* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0278 322 Pfam Domain of Kin17 curved DNA-binding protein 1 98 IPR019447 -
Amo07g0278 322 PANTHER BNAA05G13760D PROTEIN 1 321 - -
Amo07g0278 322 SMART kow_9 264 291 IPR005824 -
Amo07g0278 322 CDD KOW_KIN17 267 320 IPR041995 -
Amo07g0278 322 Gene3D - 1 81 IPR038254 -
Amo07g0278 322 Coils Coil 75 107 - -
Amo07g0278 322 SMART Kin17_mid_2 1 99 IPR019447 -
Amo07g0278 322 Gene3D - 211 264 - -
Amo07g0278 322 MobiDBLite consensus disorder prediction 150 188 - -
Amo07g0278 322 Coils Coil 184 204 - -
Amo07g0278 322 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 321 IPR037321 -
Amo07g0278 322 Pfam KN17 SH3-like C-terminal domain 203 256 IPR041330 -
Amo07g0278 322 Gene3D - 265 321 IPR014722 -
Amo07g0278 322 MobiDBLite consensus disorder prediction 150 174 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0278 1 321 C2H2 Transcription Factor Family AT1G55460 67.751 1.83e-153 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0278 K13102 - gmx:100785931 530.02