LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo07g0270	ATGGAGTTTCATTTCTCATCATTCTCCATCATCCTTCAAAGTCCTATTATCATTATCATCTTAATCTCTTTGATCCTCAAGTTGGGAAGAAAGAGATTCAAAACTAATGGCAGAGCATCAAGTAATAATCTTCCACCAGGCCCATGGAAGCTACCAATTCTCGGAAGCATCCACCATCTCATCGGCGATCTTCCACACCGCCGCCTAACAAAACTATCCAAAAAACATGGCCCCATAATCCACATGCAGCTCGGAGAGACACCAGCCATAGTCATTTCTTCACCGGAGATCGCCAAACTGCTCTTCAAAACCCATGACACCGCCTTCGCTCAACGGCCTCAGTTTCCCGCCATTGAAGCTCTAACTTATGGTTGGTCAGATCTTGCGTTTTCGCCATACGGAAACTTCTGGAAGCAGGTAAGGAAGATTTGCACGGTGGAATTGTTGAGCGCCAAGCGCGTTAGATCCTTCAAGTTCATAAGAATGGAAGAGGTTTCAAGCTTAGTAAGATCTGTCTCCATGAACGTTGGTTCATCCATCAACCTCACTGAGATGTTCTTGAACATGTCATATAGCATCATAGCGAGAGTCATATTCGGAAAGAAAACGAAGGATCAAGACGCATATGTTTCAATCATCAAGGAAACTTTAACATCTTCATCACTTGCTTTTGGTGTTAGTAACTTGTTTCCTTCTCAGAAATGGTTGCATGTGATTAGTGGAGTGGAATGTAAAGTGAAGGAGATGCATAGAACATGTGATAAGGTTCTTGATGATATCATTGATGAAGCAACATCAAAGATAGATGGAGATGGAGATGGTAGTCTTCTGTGTATTCTTTTGAGACTCAAAGAAAATGGTGCTTGTGAATTTCAATTGACAAATGATAATATTAAAGCTATTCTTCAGGACATGTTAATTGCGGGAGGTGAAACTACATCTTTAACTGTGGAATGGATTTTCTCTGAGATGCTAAAAAATCCAAGAGTGCTGAAGAAAGCACAAGCAGAAGTTAGGGAAGTTTTTGGTAACAAAGAATTGAAATTTCTAAAAGCAGTGATTAAAGAAAGTATGAGACTACACCCTCCAACTCCTGTGTTACTTCCAAAAGAGTGCCTTAAATATTGTGAGATCAATGGATACACAATACCAGTTGGAACTCAAGTGTTTGTAAATGCATGGGCAATTGGAAGAGATCCCAAATATTGGAGTGAAGCAGAGAGATTCTATCCTGAGAGATTCTTGGATAGTGAAATTGATTACAAAGGATCCCATTTTGAATTCATCCCATTTGGTGCAGGGAAGAGAATGTGTCCTGGCATTTCATTTGCTGAACCTAATATTGAACTTCCACTTGCACAATTATTGTATTATTTTGATTGGGAACTTCCCTTGGGAATTAGTCATAAGAATTTTGACATGACTGAAGATTTAGGCAGTACTATGAGAAGGAAAAATGAGCTATTTGTGATTCCTATGGTCCACCATAATTTTCGTTTCTCATCATCTCCCATGGTGCTAAGTCTTATCATCATCATTTCAATATCTTTGATCCTAAAATTGAGAAAGAGACTCATCAAAACTAACCGCAAAGCCTCCTCAAAGAATCTTCCACCAGGGCCATGGAAGCTTCCAATTTTCGGCAGCTTACACCATCTCCTCGGTGGTCTTCCACACCGCCGCCTAACAGAGTTATCCAAGAAACATGGCTCCTTGATGCATATTCAGCTCGGAGAGACATCAGTCATCGTTATTTCTTCCCCGGAGATCTCGAAACAGATCTTCAAAACTCACGACACCGCCTTCGCTCAACGGCCTCAAATCGTCGCCGCCGAAGCTGTAACTTACGGTTACATCACCTTCACGCTTTCACCCTATGGAGAATACTGGAAGCGCATAAGAAGAATTTGCACGCAAGAATTGCTCAGCGCAAAGCGCGTGCGATCGTTTCAATCCATAAGAAACGAAGAAGTTTCTAGATTAGTAAGATTTGTTTCTAGAAACATCGGTTCTGTTATCAATCTTAGCGATGCGCTTCTCAATTTGACGTATAGCATTACTGCGAAGGCGACGTTGGGTTCAAAAAGCAGTGACCAGGAAGCGTTTATTTCTTACATGAAGAGAATTTTGAGAACGAATGAGAATTTCAATGTTAGTAACATCTTCCCTTCCCAAAAGTGGCTGCATAGGATTAACGGAGCCATGCGTGAATTGGAGGATATGCATAGAACAAGTGATAGAATTCTTGATGATATAATCGCTGCAGCAAAATCCAAGACTATTAATGCAGATGGTACTCTTCTCTCTTTTCTTTTGAGCCTCGAAGCAGATAACGGCACCCCTGAATTTCAATTCTCAAGAAACAATGTTAAAGCTCTTCTTCAGGACATGCTACTTGCTGGGAGTGAGACATCATCTTCAACTATGGAATGGGTTTTTTCAGAGATGCTAAAAAATCCAAGAGTGCTAAAAAAGGCACAAGCAGAAATTAGAGAAGTTTTCGATTATGTGGACGAGAATGATCTTGGGGAACTTCAATTTCTAAAAGCAATTATTAAAGAAAGTATGAGACTACATCCTCCAGGTGGTGCTTTACTTCCAAGAGAATGTCGAGAAACTTGTGAGATCAATGGATACACAATACCAGCAGGAACCCAAGTGCTTGTGAATTCATGGGCAATTGGAAGAGATCCCAAGTATTGGAATGAAGCAGAGAAATTCTATCCTGAGAGGTTCTTGGATAGTGAAATTGACTACAAAGGATCCCATTTTGAATTCATCCCATTTGGTGCAGGAAAGAGAATGTGTCCTGGCATGTTATTTGCTCTACCAAACATTGAACTTCCACTTGCACAATTGCTATACTATTTTGATTGGGATCTTCCCTTTGGAGTTAGTCATGAGAATTTGGACATGATAGAAGATTTTGGCATTACTATGAGAAGGAAAAATGATTTATTTGTGGTTCCCATTTCACATCATCATTTGCCACTTGAATAA	3000	0.4027	MEFHFSSFSIILQSPIIIIILISLILKLGRKRFKTNGRASSNNLPPGPWKLPILGSIHHLIGDLPHRRLTKLSKKHGPIIHMQLGETPAIVISSPEIAKLLFKTHDTAFAQRPQFPAIEALTYGWSDLAFSPYGNFWKQVRKICTVELLSAKRVRSFKFIRMEEVSSLVRSVSMNVGSSINLTEMFLNMSYSIIARVIFGKKTKDQDAYVSIIKETLTSSSLAFGVSNLFPSQKWLHVISGVECKVKEMHRTCDKVLDDIIDEATSKIDGDGDGSLLCILLRLKENGACEFQLTNDNIKAILQDMLIAGGETTSLTVEWIFSEMLKNPRVLKKAQAEVREVFGNKELKFLKAVIKESMRLHPPTPVLLPKECLKYCEINGYTIPVGTQVFVNAWAIGRDPKYWSEAERFYPERFLDSEIDYKGSHFEFIPFGAGKRMCPGISFAEPNIELPLAQLLYYFDWELPLGISHKNFDMTEDLGSTMRRKNELFVIPMVHHNFRFSSSPMVLSLIIIISISLILKLRKRLIKTNRKASSKNLPPGPWKLPIFGSLHHLLGGLPHRRLTELSKKHGSLMHIQLGETSVIVISSPEISKQIFKTHDTAFAQRPQIVAAEAVTYGYITFTLSPYGEYWKRIRRICTQELLSAKRVRSFQSIRNEEVSRLVRFVSRNIGSVINLSDALLNLTYSITAKATLGSKSSDQEAFISYMKRILRTNENFNVSNIFPSQKWLHRINGAMRELEDMHRTSDRILDDIIAAAKSKTINADGTLLSFLLSLEADNGTPEFQFSRNNVKALLQDMLLAGSETSSSTMEWVFSEMLKNPRVLKKAQAEIREVFDYVDENDLGELQFLKAIIKESMRLHPPGGALLPRECRETCEINGYTIPAGTQVLVNSWAIGRDPKYWNEAEKFYPERFLDSEIDYKGSHFEFIPFGAGKRMCPGMLFALPNIELPLAQLLYYFDWDLPFGVSHENLDMIEDFGITMRRKNDLFVVPISHHHLPLE*	1000

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo07g0270	999	Gene3D	Cytochrome P450	523	991	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo07g0270	999	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	431	440	IPR017972	GO:0005506\|GO:0016705
	Amo07g0270	999	Pfam	Cytochrome P450	538	981	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo07g0270	999	Pfam	Cytochrome P450	45	479	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo07g0270	999	PRINTS	E-class P450 group I signature	392	416	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo07g0270	999	PRINTS	E-class P450 group I signature	317	343	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo07g0270	999	PRINTS	E-class P450 group I signature	351	369	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo07g0270	999	PRINTS	E-class P450 group I signature	73	92	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo07g0270	999	PRINTS	E-class P450 group I signature	189	207	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Amo07g0270	999	PRINTS	E-class P450 group I signature	438	461	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo07g0270	Amo-Chr7	2423145	2435262	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Amo07g0270	506	990	Cytochrome P450	AT3G26300	39.113	8.18e-113	355

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo07g0270	-		K23807	mesc:110611911	1011.91

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