Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0267 ATGATGAATGCCACTGAACTAAATAATGTAACAGAAATTGGCAGTGCCATATTGTTACTACCTGTAATTACAAATAGCACTAAGGCATCAGATAAGGGTTCAATGGAGGGACAAGAATTAGGCATGTCTAACACAGCAACTCTTTGGGTTCAATCTGATTTCTTCTGTGCAACTGTTCTGACTATTGACATAACAAAACCTATTATGGTAGCTGAGAATTGGGGAGCAATTGCAGCTCATCATAGAAATTCAGCAAAAGAAGATACAGGATTTTCATTTGTTAATTGCAAAATCAAAGGAAATGGTAGAATCTTGCTTGGAAGAGCTTGGGGAGAATATTCAACAACAATTAAAAGTTTAAAACTATTCATATTCTGGTTTTACAAGACTGCAGTGTTTGGAGAGTATCAGTGTTATGGAAAAGGATCAAATAGAACTGGAAGGGTAGAATGGTCAAAAAATTTCAACAGTGAAGAAGCTATGCCTTTTCTTGGTAGAGACTATATAAATGGAGATCAATGGCTTAGACTACAATATATAGGGACCCAATTAAAAAAAATTGTGAATTTAGCAGCAGCAGCAGAAGAAGAAGAAGTGGGTGAGGAGAGTTTGGAATTGAGATCAAAGAAAGAGGTTAGAGTTATTGTGGTTGATCAACATGGTAAGGGACATTCAAAAACTGTTCAAGGTGCTGTGAATATGGAACTTATAGGTAAAAGAAATGAAACATCAAGTGCTGTGATTACTTGGAACAGCAAATCATCTGATCAAGGCCCAAATGGCCAAACATTGGGAACCTATGGTTCAGCAACTGTTGGAATTGACTCTGATTATTTCTGTGCCTCTCAGGTCACTTTTGAGAATTCAGTGGTTGCAATGCCTGGTGGAAATGGAATGCAAGCAGTGGCACTAAGGGTAAACAGTAATAGAGCCATGTTCTATAAAGTTAAGATCAAAGGAACACAGGATACTCTCTTAGACAACACAGGAACACATTACTTCTATAAATGTTACATCCAAGGAAAGATTGATTTCATCTTTGGCAGTGCTAAATCACTCTATGAGAAATGTAGGCTTGAATCAATAGCTGAGAGCTTTGGAGCAATTGCAGCACATCATAGGGATTCAGAAAATCAAGACACAGGATTTTCATTTGTAGGATGCAAGATTAGAGGGAGTGGGAGTGTGTACCTTGGAAGAGCATGGGGTAACTACTCAAGAATTATTTACTCCAATTGTTACATGGATGATATCATCAATCCTCAAGGTTGGTCAGAATGGAACCATCCAGAAAGAAAAAGGACTGCAGTGTTTGGTGAATATAAGAACATGGGAAGAGGAGCAGATAGAAGAGAGAGAGTGCCATGGTCAAAATCATTCAACTATCAGCAAGCAAGGCCTTTCCTTGACAAGAGCTTCATCAATGGAGATCAATGGCTCAGACTCTAG 1449 0.3823 MMNATELNNVTEIGSAILLLPVITNSTKASDKGSMEGQELGMSNTATLWVQSDFFCATVLTIDITKPIMVAENWGAIAAHHRNSAKEDTGFSFVNCKIKGNGRILLGRAWGEYSTTIKSLKLFIFWFYKTAVFGEYQCYGKGSNRTGRVEWSKNFNSEEAMPFLGRDYINGDQWLRLQYIGTQLKKIVNLAAAAEEEEVGEESLELRSKKEVRVIVVDQHGKGHSKTVQGAVNMELIGKRNETSSAVITWNSKSSDQGPNGQTLGTYGSATVGIDSDYFCASQVTFENSVVAMPGGNGMQAVALRVNSNRAMFYKVKIKGTQDTLLDNTGTHYFYKCYIQGKIDFIFGSAKSLYEKCRLESIAESFGAIAAHHRDSENQDTGFSFVGCKIRGSGSVYLGRAWGNYSRIIYSNCYMDDIINPQGWSEWNHPERKRTAVFGEYKNMGRGADRRERVPWSKSFNYQQARPFLDKSFINGDQWLRL* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0267 482 Gene3D - 233 482 IPR012334 -
Amo07g0267 482 PANTHER PECTINESTERASE QRT1 70 177 - -
Amo07g0267 482 PANTHER PECTINESTERASE QRT1 235 482 - -
Amo07g0267 482 SUPERFAMILY Pectin lyase-like 38 181 IPR011050 -
Amo07g0267 482 SUPERFAMILY Pectin lyase-like 214 480 IPR011050 -
Amo07g0267 482 Gene3D - 65 184 IPR012334 -
Amo07g0267 482 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 20 64 - -
Amo07g0267 482 Pfam Pectinesterase 71 172 IPR000070 GO:0030599|GO:0042545
Amo07g0267 482 Pfam Pectinesterase 233 477 IPR000070 GO:0030599|GO:0042545
Amo07g0267 482 PANTHER PECTINESTERASE QRT1 20 64 - -
Amo07g0267 482 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 70 177 - -
Amo07g0267 482 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 235 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0267 Amo-Chr7 2405098 2412636 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0267 213 434 Carbohydrate Esterase AT5G55590 53.755 6.93e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0267 K01051 - gmx:100804220 432.18