Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0220 ATGATCATGGAAAATGGTAGGGAGGATCATGAGATTGAGGACATGTCAATGTCAATGTCAATGTCACCACCTTCTGTTGGTTCCATGCAAATAGCTGGAAGCAATGGCTTTGGCCACAGCATAGAGTTCATGTCTCAAGCATATCTTCCCAATAGCTACTCAGAAGTTGTCCTTAAAATTGTGGATTCAAGCATTAACCAAGATCCACCACTCCCCATACATCTGAAGTTTGAGGATGTAGAGTTCAAAGTGAAAAATAGCCAAACAGATTCCAACAACCCTTTAAAGAAAATGGTGACAAAGGTGGCCACACAACAAGTGGAACAAGAAAAATACAAGAAAATCCTTAAGGGTATCACAGGGAGCATTGGTCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGCAGTGGAAAAACAACTTTGTTGAAAGTAATTGGAGGAAGATTACTTGAGAATGTAAAGGGAAACATTACTTATAATGATGTTAGATTTAATCCTGCTATAAAGAGAAGGATTGGATTTGTTACACAAGAGGATGTGCTTTTCCCTCAACTTACAATAGAAGAAACATTGATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAACAAAAATATGCAAAAGTGGAAAACACTATCAAGGAGTTAGGACTTGAAAGATGTCGCCACACGAAAATTGGTGGAGGATTTCTAAAAGGCATATCAGGAGGAGAAAGGAAGAGAACTAGCATAGGCTATGAAATTCTTGTTGATCCTTCATTGCTGTTACTTGATGAACCAACTTCAGGTCTTGATTCAACCTCAGCTAACAAACTTCTCCTCACTCTTCAAGGACTTGCCAAGGGTGGGAGGACCATAATAACTACAATTCACCAACCATCAAGCAGAATCTTTCATATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCTGTTTATTATGGAAAGGCTAGAGACTCAATGGAATACTTTTCTTCATTGAGATTCGCCCCGGAGATACCGATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGTCAAGTGAATGACATAAGTGTTCCTCAAGAAATTTTGGGAGATCAAGAATCTTCCGAGCCTTCAAAAGCTGTTATTAAGTATCTAAAACTCAAGTACAAAGAAATTCTGGACCCAAAAGAAAAGCTAGAGAACCATGGAGTGGTAAACACACCAAAACATCTTCAGCTAGCAATTCAGGTTAAAAAGGAGTGGACATTGAGTTGGTTGGACCAATTCATTATTCTTTATAAGAGAACATTCACAGCAAGATGCAAGGACTATTTTGATAAATTAAGACTAATTCAAGCCCTTGGAATTGCAATTATTTTGGGGCTACTTTGGTGGAAATCCTCAACCAACACAGAGGCTCAACTAAGAGATCAGATTGGTTTAATGTTCTATATCTGCATATTTTGGACATCTTCATGTATCTTTGGAGCAGTATATGTTTTTCCATTTGAAAAAGCCTACATAGTGAAAGAAAGGAAAGCAGACATGTATAGATTAAGTGTATACTATGCATGCAGCACTCTGAGTGACATGGTAGCACATGTTTTCTATCCTACTTTCTTCATGATTATCTTGTACTTCATGGCCGGATTCAAGAGGACGGTTGCATGCTTCTTCTTAACATTGTTTGCAGTGCTGTTAATAGCCATAACAAGTCAAGGTGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTAATACTAATGTTATTCCTTCTCACTGGTGGATACTATGTCCAGCACATACCAAAGTTCATGCAGTGGATGAAGTACCTTTCATTCATGTACTATGGATTCAGACTACTTCTAAAAGTGCAGTATTCAGGAGACCAACTCTATGAATGTGAGAGCATAGGAGGGTGTAGGACCCTTCAGAGTTCACCTTCATTTGACACTGTTAATTTGAAAGGTGGCTTACAAGAAGTTTGGGTTCTCATAGCCATGGCATTATGCTTCCGTTTTCTTGCTTACTTCTGCCTCCGCAGAAACATTGATGTATGCAATTATTAG 2082 0.3905 MIMENGREDHEIEDMSMSMSMSPPSVGSMQIAGSNGFGHSIEFMSQAYLPNSYSEVVLKIVDSSINQDPPLPIHLKFEDVEFKVKNSQTDSNNPLKKMVTKVATQQVEQEKYKKILKGITGSIGPGEILALMGPSGSGKTTLLKVIGGRLLENVKGNITYNDVRFNPAIKRRIGFVTQEDVLFPQLTIEETLIFSAFLRLPTNMSKQQKYAKVENTIKELGLERCRHTKIGGGFLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPVYYGKARDSMEYFSSLRFAPEIPMNPAEFLLDLATGQVNDISVPQEILGDQESSEPSKAVIKYLKLKYKEILDPKEKLENHGVVNTPKHLQLAIQVKKEWTLSWLDQFIILYKRTFTARCKDYFDKLRLIQALGIAIILGLLWWKSSTNTEAQLRDQIGLMFYICIFWTSSCIFGAVYVFPFEKAYIVKERKADMYRLSVYYACSTLSDMVAHVFYPTFFMIILYFMAGFKRTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWMKYLSFMYYGFRLLLKVQYSGDQLYECESIGGCRTLQSSPSFDTVNLKGGLQEVWVLIAMALCFRFLAYFCLRRNIDVCNY* 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0220 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 330 IPR027417 -
Amo07g0220 693 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 75 338 IPR003439 GO:0005524
Amo07g0220 693 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 12 688 - -
Amo07g0220 693 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 12 688 - -
Amo07g0220 693 Pfam ABC-2 type transporter 423 631 IPR013525 GO:0016020|GO:0140359
Amo07g0220 693 Gene3D - 100 333 IPR027417 -
Amo07g0220 693 SMART AAA_5 125 316 IPR003593 -
Amo07g0220 693 Pfam ABC-2 type transporter 295 355 IPR043926 GO:0140359
Amo07g0220 693 Pfam ABC transporter 116 266 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0220 Amo-Chr7 2018002 2021200 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0220 114 299 Calmodulin-binding Proteins AT2G36910 30.890 2.43e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0220 K05681 - gmx:100815259 1171.38