Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0214 ATGTCTAGAAGCTTAAGAAACCTCTCACTTTCTTCCAAAATTATCTCTTCCATAACATTGATTCTCTCAATAAACTCTCTTTTCTTCTTTTCATGTTGTTACTCTCTTGATGAACAAGGCAAAGCCCTTTTGGCATGGAAGAAAAGTTTGAATGGTAGTTCTAAAGATGCATTATTAGCATCTTGGGACCCTTCAAACCAAACACCATGCAATAACTGGTTTGGTGTGAAATGCAACTCAGAAAATGAAGTCATAGAGATAAACTTGAACTCAGTGAACTTGCAAGGTTCATTGCCTTCAAATCTTCAATCTCTTAAGTCCTTGAAGATTCTTGTCCTCTCATCAACCAACATCACAGGAAGAATCCCAAGAGAGTTTGGAGACTATCAAGAACTCATCTCAATTGATCTTAGTAGAAATTCTCTCTTTGGTGAAATACCAGAAGAGATTTGCAAGCTAAGAAAACTTGAGAGTTTAGGACTCCATGATAACTCTCTTGAAGGAAAGATTCCATTGAATATTGGAAACTTATCAAGCCTTGTGAACTTGACACTCTTTGATAACAAATTGAGTGGTGAAGTTCCAAAGAGCATTGGCTATTTGAGAAAGCTTCAAGTGTTCAGAGCTGGAGGGAACAAAAATCTCAAGGGAGAGCTTCCATTTGAGATTGGAAACTGCACTAACTTGATGATCTTAGGCCTAGCCGAAACCGGCATTTCCGGCAGTATTCCGGCATCAATAGGGATGCTGAAAAGGCTTCAAACCATTGCAATTTACACAACACTATTGTCAGGTTCTATTCCTGAAGGGATTGTGAACTGCAGTGAGTTGCAGAATCTTTACTTGTACCAGAACTCTATTTCTGGTTCAATTCCAACTCAAATTGGAAAACTCAGCAAGCTTCAGAATCTACTCTTGTGGCAGAACAATATAGTTGGAACAATTCCTCAAAGTCTTGGAAGCTGCACAGAACTCAATGCTATAGATTTGTCACTGAATCTTCTCACAGGTAGCATACCAAAGAGTTTTGGAAAGCTATCAAATCTTCAAGTTCTTCAACTCAGTGTTAACCAGATTTCAGGTACTATACCTGAAGAAATCTCAAACTGCACTTCTCTGTATCAGATTGAAGTTGACAACAATGCTATTTCTGGGGAGATTCCTTCTCTTATTGGCAACTTGAGAAGCTTGACTCTGTTCTTTGCATGGAAGAACAAGCTAACTGGAACAATTCCAGATAGTCTTTCAGATTGCAAAGATCTTCAGGAGCTTGATCTTTCATACAACAGTTTGATTGGTCCAATACCGAAACAACTATTCGGATTAAAGAACCTCTCAAAGCTGCTGCTTCTTTCCAATGAATTCTCAGGCCTTATTCCACCTGATATTGGTAACTGCACAAGTTTATACAGGTTGAGGTTGAACCAGAACAAATTTTCAGGAACTATTGCATCTGAGATTACCAACTTGAAGAATCTAAACTTTCTTGATCTTGGAAGCAACCATCTTGTAGGGGAGATTCCTCAAGAACTTCACAGATGCCGAAAACTCGAGTTTCTCGATCTTCATTCCAATAGCCTCACAGGTTCAGTTCCATATATGCTTCCAACAAGCCTGCAATTCATTGATTTCTCAGATAATAGGCTAGAAGGTGAACTAAACCATTCCATTGGTTCACTAACTGAATTAACAAAAGTCAACTTGGGAAAGAATCTTCTCAGTGGAAGAATCCCTTCAGAGATTGCTTCTTGTTCTAAGCTGCAACTTCTAGACTTGGGAGGCAATGGCTTTTCAGGTGAAATTCCAAAGGAAATTGGTCAAATTCCTTCGCTTGAAATCGGCCTCAATCTCAGCTATAACCAGTTTTATGGTGAAATTCCAGCAGAATTCTCTGGCCTTAGCAAACTTGGAGTGCTTGATCTTTCACACAACAAGCTCTCAGGGAAATTAGATGCTCTTTCTGAGCTTCAAAATCTTGTTTCCTTGAATGTTTCCTTCAATCATTTCTCTGGTGAATTGCCTAACACTCCATTCTTCAGGAAGATTCCAATCAGTGATATCACTTCAAATGATGGTCTCTTCATTGCTGGTGCTGCTACACACAAAGTTCATGCAAGATTAGCTATGAAGATCATAATGTGCATTCTCTTGATCACAAGTGCAGGAGTAGCACTCTTCACAATCGGTTTCTTGATTCGCGCTTATATGGCCAACAAATCACTCATGAAAAGTGAAAATTGGGAGATAAATTTGTACCAGAAGTCTGAATTCTCATTCTCTATTGATGACATTGTCAAGAATCTGATATCAGCCAATGTGATTGGAACTGGAAGCTCTGGTGTTGTGTACAAGGTAGAGACTCAAAATGGCGAAACACTAGCAGTTAAGAAGATGTGGACATCATCATCAGAGTCCAATGGAGCATTCAGCTCAGAGATTAAGATACTAGGTTCAATCAGACACAAGAACATCATCAAGCTTCTTGGTTCTGGATCCAACAAGAACAAGAGCATGAATCTGCTGTTCTATGAGTACCTCCCTAATGGAAGCCTGAGTTCATTGCTTCACGGTTCAGGAAAAGGGAAAGCAGAATGGAAAACCAGATATGATATTGTGTTAGGCTTGGCTCATGCACTTGCATGTTTGCACCATGATTGTGTGCCTCCTATAATTCATGGAGATGTAAAAGCTATGAATGTGTTATTAGGCCATGGCTATCATCCTTATCTTGCTGACTTTGGTCATGCAAGAATTGTAACTGAAAATGCTGACAAGCCAGTTCAAAGACACTACCTTACTGGTTCCTATGGATACATGGCTCCAGAGCATGCATTGATGCAGTGTATCACTGAGAAAAGTGATGTTTACAGTTTTGGAGTGGTGTTACTTGAGATCCTCACAGGAAGGCACCCTTTGGATCCAACTCTTCCTGAGGGTGCAAACTTGGTTCATTGGGTCAAGAACCACTTGGCTAACAAAGGAGAACCATTTGAGATCATTGACACAAATCTTAGAGGGACAAGAAATGACCTTACTATGCACCATGAGATGCTTCAAACTTTGGCAGTGTCATTTTTATGTATCAGCAACAAACCTCATGAACGTCCTACAATGAAGGACACTCTTGCAATGCTCAAGGAAATTAGACCCTTTGGTAAAGACTCAGGGGAAGATCATCATGTGTTCAAGGGAGGTTTTTAA 3201 0.3971 MSRSLRNLSLSSKIISSITLILSINSLFFFSCCYSLDEQGKALLAWKKSLNGSSKDALLASWDPSNQTPCNNWFGVKCNSENEVIEINLNSVNLQGSLPSNLQSLKSLKILVLSSTNITGRIPREFGDYQELISIDLSRNSLFGEIPEEICKLRKLESLGLHDNSLEGKIPLNIGNLSSLVNLTLFDNKLSGEVPKSIGYLRKLQVFRAGGNKNLKGELPFEIGNCTNLMILGLAETGISGSIPASIGMLKRLQTIAIYTTLLSGSIPEGIVNCSELQNLYLYQNSISGSIPTQIGKLSKLQNLLLWQNNIVGTIPQSLGSCTELNAIDLSLNLLTGSIPKSFGKLSNLQVLQLSVNQISGTIPEEISNCTSLYQIEVDNNAISGEIPSLIGNLRSLTLFFAWKNKLTGTIPDSLSDCKDLQELDLSYNSLIGPIPKQLFGLKNLSKLLLLSNEFSGLIPPDIGNCTSLYRLRLNQNKFSGTIASEITNLKNLNFLDLGSNHLVGEIPQELHRCRKLEFLDLHSNSLTGSVPYMLPTSLQFIDFSDNRLEGELNHSIGSLTELTKVNLGKNLLSGRIPSEIASCSKLQLLDLGGNGFSGEIPKEIGQIPSLEIGLNLSYNQFYGEIPAEFSGLSKLGVLDLSHNKLSGKLDALSELQNLVSLNVSFNHFSGELPNTPFFRKIPISDITSNDGLFIAGAATHKVHARLAMKIIMCILLITSAGVALFTIGFLIRAYMANKSLMKSENWEINLYQKSEFSFSIDDIVKNLISANVIGTGSSGVVYKVETQNGETLAVKKMWTSSSESNGAFSSEIKILGSIRHKNIIKLLGSGSNKNKSMNLLFYEYLPNGSLSSLLHGSGKGKAEWKTRYDIVLGLAHALACLHHDCVPPIIHGDVKAMNVLLGHGYHPYLADFGHARIVTENADKPVQRHYLTGSYGYMAPEHALMQCITEKSDVYSFGVVLLEILTGRHPLDPTLPEGANLVHWVKNHLANKGEPFEIIDTNLRGTRNDLTMHHEMLQTLAVSFLCISNKPHERPTMKDTLAMLKEIRPFGKDSGEDHHVFKGGF* 1067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0214 1066 ProSiteProfiles Protein kinase domain profile. 768 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0214 1066 SMART serkin_6 768 1052 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0214 1066 Gene3D Ribonuclease Inhibitor 340 434 IPR032675 -
Amo07g0214 1066 Gene3D Ribonuclease Inhibitor 435 534 IPR032675 -
Amo07g0214 1066 Gene3D Ribonuclease Inhibitor 154 241 IPR032675 -
Amo07g0214 1066 Gene3D Ribonuclease Inhibitor 614 701 IPR032675 -
Amo07g0214 1066 Pfam Protein kinase domain 772 1042 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0214 1066 PRINTS Leucine-rich repeat signature 421 434 - -
Amo07g0214 1066 PRINTS Leucine-rich repeat signature 633 646 - -
Amo07g0214 1066 SUPERFAMILY Protein kinase-like (PK-like) 758 1045 IPR011009 -
Amo07g0214 1066 Gene3D Ribonuclease Inhibitor 242 339 IPR032675 -
Amo07g0214 1066 Gene3D Ribonuclease Inhibitor 535 613 IPR032675 -
Amo07g0214 1066 SMART LRR_typ_2 153 177 IPR003591 -
Amo07g0214 1066 SMART LRR_typ_2 490 514 IPR003591 -
Amo07g0214 1066 SMART LRR_typ_2 298 322 IPR003591 -
Amo07g0214 1066 SMART LRR_typ_2 633 656 IPR003591 -
Amo07g0214 1066 SMART LRR_typ_2 560 584 IPR003591 -
Amo07g0214 1066 SMART LRR_typ_2 346 370 IPR003591 -
Amo07g0214 1066 SMART LRR_sd22_2 633 655 - -
Amo07g0214 1066 SMART LRR_sd22_2 274 300 - -
Amo07g0214 1066 SMART LRR_sd22_2 536 562 - -
Amo07g0214 1066 SMART LRR_sd22_2 418 444 - -
Amo07g0214 1066 SMART LRR_sd22_2 490 522 - -
Amo07g0214 1066 SMART LRR_sd22_2 346 369 - -
Amo07g0214 1066 ProSiteProfiles Leucine-rich repeat profile. 635 657 IPR001611 GO:0005515
Amo07g0214 1066 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1056 - -
Amo07g0214 1066 Pfam Leucine rich repeat 615 669 IPR001611 GO:0005515
Amo07g0214 1066 Pfam Leucine rich repeat 300 359 IPR001611 GO:0005515
Amo07g0214 1066 ProSitePatterns Serine/Threonine protein kinases active-site signature. 890 902 IPR008271 GO:0004672|GO:0006468
Amo07g0214 1066 SUPERFAMILY RNI-like 86 408 - -
Amo07g0214 1066 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Amo07g0214 1066 Gene3D Phosphorylase Kinase; domain 1 732 845 - -
Amo07g0214 1066 Gene3D Ribonuclease Inhibitor 38 153 IPR032675 -
Amo07g0214 1066 Gene3D Transferase(Phosphotransferase) domain 1 846 1060 - -
Amo07g0214 1066 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1056 - -
Amo07g0214 1066 SUPERFAMILY RNI-like 315 669 - -
Amo07g0214 1066 Pfam Leucine rich repeat N-terminal domain 37 79 IPR013210 -
Amo07g0214 1066 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0214 Amo-Chr7 1972519 1976221 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0214 33 1065 Receptor kinase-like Gene Family AT5G56040 63.218 0.0 1268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Amo07g0214 Pkinase 3.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0214 - - gmx:100802880 1482.62