Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0211 ATGCGGCAGGAGACTCCATGTAAAAGAGGTTTGAAGGGTAGCATCAACAACAACAATGAAGATGAGATCATCAATGATCATGAATTAGCTCAGAGGAAAGCAGAGGAAGCTGCTTCAAGGAGGTATCAAGCAGCAGAATGGCTTCGCCAAATGGACAGTGGCGCGTGGGCATCACTCTCCAAAGAACCCTCCGAGGAAGAGTTCTGCCTCTCACTTCGCAACGGTCTCATTCTCTGCAACGTCCTCAACAAGGTCAACCCCGGTGCCGTCCTCAAGGTGGTGGAGAATCCCACCCCTGCTGTTCAATCTGCAGAGGGAGCTGCACAATCTGCAATTCAGTACTTTGAGAATATGAGGAACTTTCTGGAAGCTGTTAAGGACATGCAGCTTTTGACATTCGAAGCTTCAGATTTGGAGAAGGGAGGTTCATCAAGCAAAGTTGTGGACTGCATTCTGTGTTTGAAAGGGTACTATGAATGGAAGCTTTCAGGTGGAGTTGGGGTGTGGAGGTATGGAGGAACTGTGAGGATCACTTCCTTTCCGAAAGGTTCTTCGCCTTCCGACGTGGCGAGCAGTGAAAGTGCTGATGAGTCACTGGATGAGTCTGAGTTGTCACAATATGAACAGATGCTAGAGTTTCTTCGTCTATCCGAAGATGTTGCCGTCGAAGAAACCAAAACTGCTGATGCCTTGGCCTTCCTGTTTGATCAATTTGGACTGAAGCTTCTCCTGGCATACCTTAGAGAGACAGATGGGGTTGAAGATCTTCCACTGAATGCAATGGTAATTGATACTTTGCTCAGAAAATTAGCCAAGGATTTCTCTGCAATGCTTGTTTCTCAAGGCAAACAGCTTGGAGTTCTGCTGAAGAGAATACTGAAAAGCGATTGTGGTCGCATCACTAAGAGAGATTTTATAGAAGCTATCACATTATATCTTAATCAAAGAAGTAGTTTGGCATCAGATGATTTGTCGAAATTCTGCATTTGTGGCGGAAAGCGTGATAATACAATGCATAATAACAATCATTGTTCAAAACATGTGGAAATAATTGATGCTCAGCAGAAACAACTTGAGAGGATGAAATACTTATTTGATGAGCTAAAGATGGAGGTCAAACAAATTCAATCTGAGTGGGAGAAAGAACTGAGCAGGCTAGAGAATCATATCAAGAGTCTTGAAGTGACTTCCACATCCTACCACAAAGTTTTGGAGGAGAACCGCATTCTATATAATCAAGTACAAGACCTCAAAGGAGCCATAAGGGTCTACTGTAGAGTGAAGCCTTTCTCGCCAGGACAGTCAAATGCGCAATCTACAGTAGACTATATAGGAGAAGATGGAAACATAATGATAGTAAATCCTCAAAAGCAAGGGAAAGAAGCTAGAAAGGTGTTTTCATTCAATAAGGTGTTTCCAACAAATGTCACACAAGAACAAATTTACGCGGACACTCAACCACTCGTCAGGTCCGTTTTAGATGGCTACAACGTTTGCATTTTTGCATATGGACAGACCGGTTCAGGAAAGACCTATACAATGAGCGGCCCTGATCTGATGTCTGAAGAGACATGGGGTGTAAATTACAGGGCTTTGCGTGACTTGTTTCATATATCAAAGGAAAGGGCAGAAGCCATAAAATATGAAGTTGGTGTCCAGATGATTGAAATATACAATGAGCAAGTTAGAGATTTATTAGTTAGCGATGGTTCTAATAGAAGATTAGATATACGAAACAATTCTCAATTGAATGGACTTAATGTGCCAGATGCAAGTTTAGTTCCAGTTAGTTGTACTCAAGATGTTCTTGATTTGATGAGAATTGGTCAGAAGAACCGCGCTGTAGGCGCTACAGCTCTAAATGAGCGAAGCAGCCGTTCTCACAGTGTGTTGACAGTCCATGTTAGAGGGAAGGATCTAGTTTCAAACTCCATTCTCAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGCGAGAGAGTGGACAAATCTGAGGCTGTTGGTGAAAGACTAAAGGAGGCACAGCATATAAACAAATCTCTTTCTGCACTTGGAGATGTTATCTCTGCTTTGGCACAGAAGAGTCCACATATTCCTTACAGAAATAGCAAGCTCACACAAGTGTTACAAGACTCTTTAGGTGGGCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAAGTCAATGCTCTTGGGGAAACAATTAGCACACTAAAATTTGCTGAGAGGGTTGCTTGCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGTGAAATCCGAGAGCTAAAGGATGAGATTTCGAATATCAAATTAGCATTGGCAAGGAAGGAAACTGAACTTGAACAATGGAAAACTGGGAATACTAGAAATGCCATCGAATCTCAGAAACCAAGGGCTGTTTCGCCATATCGTTTGCCTAAAAATGTTACCAGTGGCAGTATTAAGTCTGATAATAGTCAAAGATCCCTGGATGATAGAAGTTCTGAGGCTAAAATTAGTTCTTCGGGTAAGCATACAAGATCAAGACTCCCCTCAACATTTATGGACAAGGATTCCATCCCAAAATCATTTCTTCTAACTGAAGAAAAGCTAGTAAGCTCATCAGGGAGGGGTCGATCGCCATCGCCTCCAATCAGGAGATCAATATCCACTGATAGAGGCTCTGTCATTAAAAGCAAGGTCAAAAGTGACACACCAGAAAACCAACCAATACTAAAGAATCAATTTCCAGCTAGAGTAAACAAGTCTCTTGCTATAATGCAAATGGCCCAATCTATAGACAATAACTCAAAGGTGTATGTGAATTCGCAAGAGACATCCAAACAAGACAGCAACATTTCTGAAACACTTACTAACCTTCAAAAGATCAGCTCCAGGAAAGTTCATCAAGAACAGGAAGAAGAACAATTCAAGCAAGTATTTAGTGTATCAAAACAAAGTGTTAACAAGAAAAGCAAGGCTGATAGTAAGGCTAAGGCCAAGCAGCATCATCAACAAATACCCTTTAGGATTCAAAAATCTGATATGGAAACTGCTGGTGAAATAACTGCTGTTGCGCCTCGAAAAATCGATTATTTTGAGCCAGAAAATGATCTCAGGTTCATGGACTCTGCAGTCCATGGTACTTTGAATCCGAAAAATACTCGACAGAACATGTCAAAGAATTGTCAAAACATAGGATCAAGAGGAATGGTGCAAGCAGCTGAGCCTTTATTGACTAGCAAAGTTGAGAACAAACTTATAAATGGTTCCGGTCGCAGCAATACCACAATGCATGAATTTAGAAGGAGCAGATCTACACCCCGTGGGAAGTTTTTTGTTTCATCTTGA 3339 0.4163 MRQETPCKRGLKGSINNNNEDEIINDHELAQRKAEEAASRRYQAAEWLRQMDSGAWASLSKEPSEEEFCLSLRNGLILCNVLNKVNPGAVLKVVENPTPAVQSAEGAAQSAIQYFENMRNFLEAVKDMQLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKGSSPSDVASSESADESLDESELSQYEQMLEFLRLSEDVAVEETKTADALAFLFDQFGLKLLLAYLRETDGVEDLPLNAMVIDTLLRKLAKDFSAMLVSQGKQLGVLLKRILKSDCGRITKRDFIEAITLYLNQRSSLASDDLSKFCICGGKRDNTMHNNNHCSKHVEIIDAQQKQLERMKYLFDELKMEVKQIQSEWEKELSRLENHIKSLEVTSTSYHKVLEENRILYNQVQDLKGAIRVYCRVKPFSPGQSNAQSTVDYIGEDGNIMIVNPQKQGKEARKVFSFNKVFPTNVTQEQIYADTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLMSEETWGVNYRALRDLFHISKERAEAIKYEVGVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDASLVPVSCTQDVLDLMRIGQKNRAVGATALNERSSRSHSVLTVHVRGKDLVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEVNALGETISTLKFAERVACIELGAAQSNKETGEIRELKDEISNIKLALARKETELEQWKTGNTRNAIESQKPRAVSPYRLPKNVTSGSIKSDNSQRSLDDRSSEAKISSSGKHTRSRLPSTFMDKDSIPKSFLLTEEKLVSSSGRGRSPSPPIRRSISTDRGSVIKSKVKSDTPENQPILKNQFPARVNKSLAIMQMAQSIDNNSKVYVNSQETSKQDSNISETLTNLQKISSRKVHQEQEEEQFKQVFSVSKQSVNKKSKADSKAKAKQHHQQIPFRIQKSDMETAGEITAVAPRKIDYFEPENDLRFMDSAVHGTLNPKNTRQNMSKNCQNIGSRGMVQAAEPLLTSKVENKLINGSGRSNTTMHEFRRSRSTPRGKFFVSS* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0211 1112 SUPERFAMILY Calponin-homology domain, CH-domain 32 182 IPR036872 -
Amo07g0211 1112 Coils Coil 351 396 - -
Amo07g0211 1112 MobiDBLite consensus disorder prediction 867 890 - -
Amo07g0211 1112 MobiDBLite consensus disorder prediction 822 839 - -
Amo07g0211 1112 PANTHER KINESIN-LIKE PROTEIN KLP-3 20 1107 - -
Amo07g0211 1112 MobiDBLite consensus disorder prediction 789 853 - -
Amo07g0211 1112 MobiDBLite consensus disorder prediction 977 1002 - -
Amo07g0211 1112 SMART ch_5 40 157 IPR001715 GO:0005515
Amo07g0211 1112 ProSiteProfiles Kinesin motor domain profile. 420 748 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo07g0211 1112 CDD KISc_C_terminal 418 750 - -
Amo07g0211 1112 PRINTS Kinesin heavy chain signature 618 635 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo07g0211 1112 PRINTS Kinesin heavy chain signature 649 667 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo07g0211 1112 PRINTS Kinesin heavy chain signature 495 516 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo07g0211 1112 PRINTS Kinesin heavy chain signature 698 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo07g0211 1112 Gene3D Kinesin motor domain 362 750 IPR036961 -
Amo07g0211 1112 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 20 1107 - -
Amo07g0211 1112 MobiDBLite consensus disorder prediction 1085 1112 - -
Amo07g0211 1112 ProSiteProfiles Calponin homology (CH) domain profile. 38 159 IPR001715 GO:0005515
Amo07g0211 1112 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 421 785 IPR027417 -
Amo07g0211 1112 Pfam Calponin homology (CH) domain 41 159 IPR001715 GO:0005515
Amo07g0211 1112 Coils Coil 762 782 - -
Amo07g0211 1112 SMART kinesin_4 418 756 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo07g0211 1112 MobiDBLite consensus disorder prediction 181 200 - -
Amo07g0211 1112 Pfam Kinesin motor domain 426 746 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Amo07g0211 1112 Gene3D - 30 159 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0211 Amo-Chr7 1958252 1964861 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0211 411 748 Calmodulin-binding Proteins AT5G65930 43.605 3.15e-77 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0211 K10406 - gmx:100811516 1605.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g0351 01 5500358 5511804 Amo07g0211 07 1958252 1964861 PCT
Amo07g0211 07 1958252 1964861 Amo01g0351 01 5500358 5511804 PCT