Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0206 ATGCTAGCCCTTCCACCACCCCCTTCAAAACAACAAATAATAAGGAATCAAAGTTCCTTAGAATCACTTGAAAACAATAGGCCAAATAAAAAACTATGGCAACCAAGAAGTCAAAGGACAAAACCAGTTATATGGTGTTTTGCAGGGTTATGTCTCATATTCAGCCTTCTACTAATCTTCTTTGGAATTGTTATATTGATATTCTACTTAGCAATCAAACCAAGAAACCCCACATTTGATATACCAAATGCAAGCCTCAATGTTGTGTACTATGACTCAACACAATACTTGAATGGTGACTTCATTCTCCTTGCAAATTTCTCAAACCCCAACAAGAGAATTGATGTAAAGTTTGAGTCTTTGGACATTGAACTCTTCTTCTCCAACCGGCTCATATCGAATCGGACGATGAATCCTTTTATGCAGAAGCCAAAGGAGACAAGGCTGCAAACTGTGAACTTGATTTCCAAGTTGGTTTTTCTGCCTCAAGATGTTGGTGTGAAGCTTCAAAGGCAAGTTGAGAGCAACAAAGTAAGCTACTATGTAAGAGGGACATTTAAGGTGAAGTTCAACATTGGTTTGATCCATTTATCTTATTGGTTGAATAGCATATGTGAAATTGAGATGACAGGTCCACCAGCTGGTGTTCTAGTTTCAAGACAATGCATAACTTCAAGGAGATGA 684 0.3801 MLALPPPPSKQQIIRNQSSLESLENNRPNKKLWQPRSQRTKPVIWCFAGLCLIFSLLLIFFGIVILIFYLAIKPRNPTFDIPNASLNVVYYDSTQYLNGDFILLANFSNPNKRIDVKFESLDIELFFSNRLISNRTMNPFMQKPKETRLQTVNLISKLVFLPQDVGVKLQRQVESNKVSYYVRGTFKVKFNIGLIHLSYWLNSICEIEMTGPPAGVLVSRQCITSRR* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0206 227 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 21 226 - -
Amo07g0206 227 Pfam Late embryogenesis abundant protein 108 202 IPR004864 -
Amo07g0206 227 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 21 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0206 Amo-Chr7 1937176 1938184 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0206 - - pvu:PHAVU_008G282100g 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g0304 11 4615628 4620298 Amo07g0206 07 1937176 1938184 PCT
Amo01g0355 01 5558564 5562532 Amo07g0206 07 1937176 1938184 PCT
Amo07g0206 07 1937176 1938184 Amo11g0304 11 4615628 4620298 PCT
Amo07g0206 07 1937176 1938184 Amo01g0355 01 5558564 5562532 PCT