Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0204 ATGAATCATCAGAAACCAAATTCTGGAGTTCTTGAATCTGTTGGTCGAATGCTGACAGAAAAAATCCATACTGACGTAACAATAAATGCTTCAGATGGAAGCATTGGAGCTCACCGCGCAGTTCTTGCTGCTCGATCACCTGTTTTTCATGGCATGTTCAAACACAATCTAAAAGAGAAAGATGATTCCACCATAAACATCTCAGACATGTCAATAGAATCTTGTCAAGCATTCATAAACTATCTTTATGGTGTCATTGAAGATGAAGAATTTTTCAAGCATAGATTGGAGCTTCTTCATGCCGCAGACAAATATGACATTTGTGATTTAAGAGATGTATGCAGTGAGAGCCTTGCAGAGGATATGGATTCAAGCAATGTTCTTGAGAGGCTTCAGGATTCATATCTGTATCAATTGCCAAAGCTGAAGCATCATTGCATGCAATATCTTGTCAAGTTTGGAAGGATATTTGACATTAAAGATGATTTCAATGCATTCTTGCAAACTGTAGATAAGGATTTGGTTATTCAACTCCTTGGTGAAGCTCTTAGTGTCTGTAAAGGCTCTTAA 570 0.3754 MNHQKPNSGVLESVGRMLTEKIHTDVTINASDGSIGAHRAVLAARSPVFHGMFKHNLKEKDDSTINISDMSIESCQAFINYLYGVIEDEEFFKHRLELLHAADKYDICDLRDVCSESLAEDMDSSNVLERLQDSYLYQLPKLKHHCMQYLVKFGRIFDIKDDFNAFLQTVDKDLVIQLLGEALSVCKGS* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0204 189 Pfam BTB/POZ domain 18 120 IPR000210 GO:0005515
Amo07g0204 189 ProSiteProfiles BTB domain profile. 24 83 IPR000210 GO:0005515
Amo07g0204 189 SMART BTB_4 24 122 IPR000210 GO:0005515
Amo07g0204 189 CDD BTB_POZ_ZBTB_KLHL-like 23 105 - -
Amo07g0204 189 PANTHER OS08G0495500 PROTEIN 3 188 - -
Amo07g0204 189 SUPERFAMILY POZ domain 3 120 IPR011333 -
Amo07g0204 189 Gene3D Potassium Channel Kv1.1; Chain A 1 152 IPR011333 -
Amo07g0204 189 PANTHER OS08G0495500 PROTEIN-RELATED 3 188 IPR044714 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0204 Amo-Chr7 1927536 1928112 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Amo07g0204 BTB 5.4e-22 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0204 K10523 - gmx:100790186 267.7