Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0203 ATGAACATGAATATGAAGGATTCTGCATATAGAGTTGAAACGACTTGTCGTCTTGCACAATGGAGAATCGACAATTTAGCTTCATGCACTTATCGCAAATCCGATCCTTTCACCATAGCTATCTGGAACTGGCATTTATCTGTGGAGAGGAACAGAGTTTCTTGTGTTAAGTTGTTTCCGGAAGCAAGGAACAATCTTCCACTTTCATCTTTCGTCATTCGCCTGCTTAGTTCTGTCAAAGATCGCAAGGCGTTGGCTCAATTAGAGGTAAGAGACAAATTGCTGAGCAGCAGAGAAGGATTTGTGTGGGGAATTGAGGTTCCACTTCCAGGGAGATTCATTATTCATGTTGAGTTCCTCGATTTGAAAGCTTCATCTTCAAATGGAGAAGATATTTGTTCCATTTGGCCTAACAGAATTATGCAGCAAAGATCAAATTCAGCAGCTCTTGAATCTCTCAGTCGAATGTTAATGGAAGGAATCCACACTGACATAACAATAAATGCTTCAGATGGAAGCATTGGAGCTCATCGCGCAGTTCTTGCTGCTCGATCGCCTGTGTTTCGTAGCATGTTCTCTCATGATCTTAAAGAGAATGATGATTCCACCATAAACATCTCAGACATGTCAACTGAATCTTGCCAAACATTTATAAACTACCTTTATGGCATCATTGAACACCAAGAATTTCTAATGCATAGATTGGAACTTGTTCGTGCTGCAGATAAGTATGACATTTGTGATTTAAGAGATGTGTGTCATGAGAGCCTTGTAGAGGATATTGATTCAAGCAATGTTCTTGAGAGGCTTCAGAATGCATATTTGTATGGATTGCCAAAGCTGAAGAATAGTTGCATGCAATATCTTGTAAAGTTTGGAAAGATATTTGACATTAGGGATGATTTCATTGTATTCTTGCAGACTGCAGATAGGGATTTGATCACTCAAGTCTTTCATGAAATTCTTGGTGTCTGGAATGGTTTTTGA 987 0.3921 MNMNMKDSAYRVETTCRLAQWRIDNLASCTYRKSDPFTIAIWNWHLSVERNRVSCVKLFPEARNNLPLSSFVIRLLSSVKDRKALAQLEVRDKLLSSREGFVWGIEVPLPGRFIIHVEFLDLKASSSNGEDICSIWPNRIMQQRSNSAALESLSRMLMEGIHTDITINASDGSIGAHRAVLAARSPVFRSMFSHDLKENDDSTINISDMSTESCQTFINYLYGIIEHQEFLMHRLELVRAADKYDICDLRDVCHESLVEDIDSSNVLERLQNAYLYGLPKLKNSCMQYLVKFGKIFDIRDDFIVFLQTADRDLITQVFHEILGVWNGF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0203 328 Gene3D Potassium Channel Kv1.1; Chain A 138 291 IPR011333 -
Amo07g0203 328 PANTHER OS08G0495500 PROTEIN-RELATED 5 328 IPR044714 -
Amo07g0203 328 SMART BTB_4 163 261 IPR000210 GO:0005515
Amo07g0203 328 ProSiteProfiles BTB domain profile. 163 222 IPR000210 GO:0005515
Amo07g0203 328 SUPERFAMILY POZ domain 146 259 IPR011333 -
Amo07g0203 328 CDD BTB_POZ_ZBTB_KLHL-like 162 244 - -
Amo07g0203 328 Pfam BTB/POZ domain 157 259 IPR000210 GO:0005515
Amo07g0203 328 PANTHER OS08G0495500 PROTEIN 5 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0203 Amo-Chr7 1916023 1918158 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Amo07g0203 BTB 9.6e-20 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0203 K10523 - gmx:100790186 481.1