Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0198 ATGCTGTGTAAGTTTTGTTTGGTGATAACAAGTGTGGTACCCAGGCACCGGATCACATCTGAGATTGTGAACGTGACAGCGTCCATACGGAAGCTCTACGAAGATAAGCATGCTCTTGGGCTCACTCCATCATCAGAACAAAATGTGGCTGAACGAATACGCTATGACCTTCGAATGGGTTCCCATTTTATTAGGGATGATGAACTTGTGGGAGTTGATTATGCCAAGAATTTGCTCACTGATTGGCTCATACATGGAGAAGCCAGGCGCACCATCATCTCCGTCGTAGGCGAAGGGGGACTCGGGAAAACAGCAATTGTTAGGAATCTCTACAACAAACATAAGGAGGATTTTGATTGTTATGCTTGGATAACTGTGTCTCATTCCTTCAAAGAGGAACATTTGCAGACTATAATACAAACTTTGTATGAGAATGATGGTAAAAAGTATCCTGTGGAGGGAATCAGGGAAAAAGAGGTGGACAAGTGTAATTTGACACAAAAACTAAGAGACTACTTGCAAGGAAAGAGCTACATGATCGTGTTTGATGATGTGTGGGAAATAAACTTTTGGGAATGCATGGAATTTGCTTTACCTGCTGATACCAACATCAGAAGCAGGATCATCATCACAACAAGGGACAGAGGAATAGCTGAATTTTGTCAACGTTCTGCTCCGGTTCATATCCACGAACTAAAACCATTACCTGCTGATGATGCTTTGAAGCTTTTTCTTTTGAAGACATTTCAATTTGACCATCATGGTTGTCCTCAAGATCTGAATGATTTGTCTCAAAGATTTGTTAAGAGGTGCAAGGGAGTGCCACTTGCCATTGTAGTTATTTCGGGCCTCCTTTCAACTAAGAAGAAAACTGTATCTGAATGGCAAAAGGTATATGATAGCCTCCGCTCAAAATTCTCCACCGATCCTCATCTTAGAAGCTTCTATCTGGTCTTGCTAGAAAGTTATCATGATCTTCCTTACCATCTGAGGTTATGCCTTTTGTACTTTGGCCTTTTCCCCCAAGATTACTCCGTTAAGTGTTCAACGCTTATTCGCCTATGGGTAGCAGAGGGCTTTGTGAATGAAAATGAGATGTTTGGAGATCAAACACTTGAGGAAGCAGCAGAAGACTACTTAGCTGAGCTCATTCGTAGAAGCTTGGTTAAAGTCTCCAATGTGTTTGTCAATGGCAAGGTTAAAAGTTGCAGGGTCCATGATTTGATGCATGACTTTATTGTCAGAAAGTGTGAGGAGTTAAACTTTTGCCAAGTGGTGAGCAAGCAACAGTTCGGATTTCATGAATGGACGAGGCGTATATCAATCCAGAATATTGACAAAAGTGCTTTTATTGGAAATGATCAAAGTTTTGTTCGGGTGCGATCCTGTCTTAGTTGTGGCATTGAAGAACTTTCAGAATCTGTGGTAAAATCTTTGTTCTCCGGTTTCAATCTCTTGGTGACATTAGGCCTTGAAGATTTTCCACTTGATCATCTTCCTGAAGTTGTAGGAAACTTATTGAATTTGAAGTATTTGAGCTTAAGGAAGACGAAAATCAAGACAATTCCCAAGTCCATTGGCAAGCTTCAAAAGCTACAAACTCTAAACCTTAGAGATACACAAGTACTAGAGCTACCTATGGAAATCAATAAACTTGTTAAGCTGCGACATCTTTTATCTTATTCCTTCGGTTCCAAAGAACATTGGCAACATTTATTAGGCTTCAGGTTGAATGGAGGGATTGGGGGTTTAACAGATTTGCAGAGTCTTGCGATGGTGGATACAAGTACAGCTAATGGGGATGGAATTATTCGAGAAATGGAGAATATGATCAATATGAAGAAGTTGGGCATTGTTGAGTTAAGTGAAGTCAATGGAAGTAGTGTTTGCAATGCCATAAAGAACATGCCCAATCTTTGCTCTCTATCCATCAAGGCAGCCGAAAACTGTGGATTTCTTGTGCTGCAAGCAATAGTTGATCCTCCTGCTAACCTGCAACGTCTTTACCTGAATGGGCCTCTGCAGAGATTGCCAGAATGGATTCCGAAGCTTAAGCATCTTATTAAGTTACGCTTGATAGGGTCAAGGCTAGCTGAAGATCCATTGCCTAAACTTGAAGGCCTGCCAGAATTGCTGGAACTCCATCTTGATCACTATTGTGAGAGTGAAGAGGTACATTTTAAATGCGGCTGGTTTGAGAAATTAAAGGAGTTAACCTTGCAGAGGATGAATACTCTGAGGACTTTAAAGATAGATAAAGGGGCATTGCCTAAGCTTGAAGTCTTGCGGCTGGGCTCATGCCCTCAAATAATAGAAGGGGCGGATGCTATTCAAAATTTGGAAGCTCTTAAGAATCTTTACCTCATTGACATGCCAATACAATTTTCATATGATATTGCTCTTAATAATCCTTACGACATTGACATGCCAAGACAATTTGCAAATGATATTTCTACCCCATTAAAGGAAAACACAACACTGTATATTTCTCCACCTTTGCTCCCTCCCCCGCAACTTACTCCGCCGCGCCTTCCTCCCAGGAGGGGACAAGTAAAAGTTAAGGTTTTACAAGATGTGGCATCCACAGCTATCAGATTTCTTTCGGCTGCCTAA 2613 0.4122 MLCKFCLVITSVVPRHRITSEIVNVTASIRKLYEDKHALGLTPSSEQNVAERIRYDLRMGSHFIRDDELVGVDYAKNLLTDWLIHGEARRTIISVVGEGGLGKTAIVRNLYNKHKEDFDCYAWITVSHSFKEEHLQTIIQTLYENDGKKYPVEGIREKEVDKCNLTQKLRDYLQGKSYMIVFDDVWEINFWECMEFALPADTNIRSRIIITTRDRGIAEFCQRSAPVHIHELKPLPADDALKLFLLKTFQFDHHGCPQDLNDLSQRFVKRCKGVPLAIVVISGLLSTKKKTVSEWQKVYDSLRSKFSTDPHLRSFYLVLLESYHDLPYHLRLCLLYFGLFPQDYSVKCSTLIRLWVAEGFVNENEMFGDQTLEEAAEDYLAELIRRSLVKVSNVFVNGKVKSCRVHDLMHDFIVRKCEELNFCQVVSKQQFGFHEWTRRISIQNIDKSAFIGNDQSFVRVRSCLSCGIEELSESVVKSLFSGFNLLVTLGLEDFPLDHLPEVVGNLLNLKYLSLRKTKIKTIPKSIGKLQKLQTLNLRDTQVLELPMEINKLVKLRHLLSYSFGSKEHWQHLLGFRLNGGIGGLTDLQSLAMVDTSTANGDGIIREMENMINMKKLGIVELSEVNGSSVCNAIKNMPNLCSLSIKAAENCGFLVLQAIVDPPANLQRLYLNGPLQRLPEWIPKLKHLIKLRLIGSRLAEDPLPKLEGLPELLELHLDHYCESEEVHFKCGWFEKLKELTLQRMNTLRTLKIDKGALPKLEVLRLGSCPQIIEGADAIQNLEALKNLYLIDMPIQFSYDIALNNPYDIDMPRQFANDISTPLKENTTLYISPPLLPPPQLTPPRLPPRRGQVKVKVLQDVASTAIRFLSAA* 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0198 870 Pfam NB-ARC domain 74 306 IPR002182 GO:0043531
Amo07g0198 870 PRINTS Disease resistance protein signature 92 107 - -
Amo07g0198 870 PRINTS Disease resistance protein signature 172 186 - -
Amo07g0198 870 PRINTS Disease resistance protein signature 271 285 - -
Amo07g0198 870 PRINTS Disease resistance protein signature 527 543 - -
Amo07g0198 870 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 337 IPR027417 -
Amo07g0198 870 PANTHER - 41 792 - -
Amo07g0198 870 PANTHER DISEASE RESISTANCE PROTEIN RP 41 792 IPR044974 GO:0006952
Amo07g0198 870 Gene3D - 48 228 IPR027417 -
Amo07g0198 870 SUPERFAMILY L domain-like 404 798 - -
Amo07g0198 870 Gene3D - 235 319 IPR042197 -
Amo07g0198 870 Gene3D - 320 417 IPR036388 -
Amo07g0198 870 Gene3D Ribonuclease Inhibitor 448 809 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0198 Amo-Chr7 1867376 1870427 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0198 93 290 WRKY Transcription Factor Family AT5G45050 26.829 9.55e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0198 K13457 - csin:114293737 596.66