Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0187 ATGTCATCATCACCATCATCATCATCATCAACATCATCATCCTCATCATCAACATCTTCTCCTTCTCCTCCTCCTCCTCCTCCTTCAAATGCTGCTGCTTCCGACGCCAATGCTGCCCCCGAGTCTTCTTTTCGGAGGTCCACCCGCGAATTCGGAGAGTCTTCTACTGCTCGCCAGCAACGACTACGTGCCATGAACGAGGCTCTGCCCGAGGTCCTTCTCGAAATACTCGCTGCTCAAGTTGCCATTGATGCTTCCAACCGCCATGGTCGCTTGGCTGCTGCTCCTGCCGTTGCTCGTTTGTTTCAGGTTTGTTCTACATGGCGAGGGGTCTCACACTTGGATCCACTGTGGCAGAGACTTACCAGATTGATCTGGCGCCGGGCCTACTTAATACGCGACACGTGGCGAGAGGAGTACATCTACTGGCATCGGACGGCTAGGAACTTTGCATTGGGAGCACCCTCTTTCCATGTCCCACACTTCGATCCTTCTATGCCTCCCAATGGCGCCGGCGACCGTCAAACCCTCCTATGCCGCTGCCTTGCTCTCTCTGACCGACACCTCGCCTGCGGCTTTGCGGATGGCACCGTCCGCCTCTTCGACGTCGAGACTCTCGCCCACGTCAGCACATTCCGGACTAACCACGGGCCGCGGTTCGGCCCGTTCTCCCGGTCCGTGTCCGGAATAATCCTCTCTAACAGCACGCTCACCTTTGCTAGACTCGACGGGGATATTTTCGTGGCGTCGGTTAACGTGGCCAACGAACCACCGCAACAGGTGGTTGCGGGTGACGTGGTGAACAACGGCGTTTTAGTTGAGTTCGCGGGAAACAGTCGGTGGTGGGTGGGCTTATACGCAGGCCTTCCGGGCCGGGCTTTCCAAATATGGGACGCGCCCAACCAGCAACTGGTATCAGTGGGCGGGACGTTAACAGATCCGGAAACGGTTATGGGATGGCACATGCTAACAGAATTAGTTGAGCCAGTTGGGCGCGTGAGAGTAACGGAACCAGATTACGTCGTGGCGTGCACGAGCTCGAGATTAGTTTGTTTTAGTTTGTGGAACCCGGAGGAAGTTATACGTGACGTGGGTTCTGTTACGGGGTTCGTTGTAAGCAGTTTGGACGCGCGTCACGATGCGTTTGTGGTTGTCGAGAGGAACGGTTACGGTACGGTGCGACGCGCCAGCACGTTCGAGCGGTTGAGTAGGTTCCGATTGAGGCCTCAGTGGGTTAGGGGTTTGTTAGCGTGCATCAACTTGAGTTATGTGTTAACCTACTCCGGGGTCACTCGGATGCTAAGGGTTTGGAACATTGAGCAACTTGCTGGGGTTTTCTGTTGCGCGTTGGAAGTTAGGGATAATGCACCTGAGGGTAATGCCATGGTGGCAAATGAAAGACACGTGGCGATTTCTTGGAATGACACCTTCATACAGTTATTGGATTTTGGTGTATAG 1458 0.5466 MSSSPSSSSSTSSSSSSTSSPSPPPPPPSNAAASDANAAPESSFRRSTREFGESSTARQQRLRAMNEALPEVLLEILAAQVAIDASNRHGRLAAAPAVARLFQVCSTWRGVSHLDPLWQRLTRLIWRRAYLIRDTWREEYIYWHRTARNFALGAPSFHVPHFDPSMPPNGAGDRQTLLCRCLALSDRHLACGFADGTVRLFDVETLAHVSTFRTNHGPRFGPFSRSVSGIILSNSTLTFARLDGDIFVASVNVANEPPQQVVAGDVVNNGVLVEFAGNSRWWVGLYAGLPGRAFQIWDAPNQQLVSVGGTLTDPETVMGWHMLTELVEPVGRVRVTEPDYVVACTSSRLVCFSLWNPEEVIRDVGSVTGFVVSSLDARHDAFVVVERNGYGTVRRASTFERLSRFRLRPQWVRGLLACINLSYVLTYSGVTRMLRVWNIEQLAGVFCCALEVRDNAPEGNAMVANERHVAISWNDTFIQLLDFGV* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0187 485 PANTHER WD40 REPEAT PROTEIN 12, 37 31 484 - -
Amo07g0187 485 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 31 484 - -
Amo07g0187 485 MobiDBLite consensus disorder prediction 1 59 - -
Amo07g0187 485 Gene3D - 172 484 IPR015943 GO:0005515
Amo07g0187 485 SUPERFAMILY WD40 repeat-like 179 441 IPR036322 GO:0005515
Amo07g0187 485 SUPERFAMILY F-box domain 98 145 IPR036047 GO:0005515
Amo07g0187 485 MobiDBLite consensus disorder prediction 1 18 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Amo07g0187 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0187 - - aip:107606416 925.235