Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0180 ATGATGGATTGCATTTCTGGTTTTGCCTCTTCCATTTCAAGAGATTTGGTGGTAGGAACAACAAATCAATTGCGCTATCCTTGTTGCTTCAATGATTTCATTGAAGACCTTGAACAAGAGGAAGAAAAGTTAATCACAACAAGGAACAGTGTTGAAGACCGTGTTAAACATGCCAGAAAACAAGTAATAAAGAATGCTGAAGTTGTGAATGCATGGTTGGAGAAATCTAACCCTCTCAAAGATAAAGCAGAGGACTTAATAAGAAAAGCAAGAACAAACAGGAGTTGTTGTTTTGGCTACTGTCCAAATTGGATTTGGAAGTATCATCTAGCCAAGAAGTTAGCAAAAAGAAGAAAGGAAGTTGAAATGTGTGTTCAAGAAGGTAAAATGTATATACAATATGAAAGGATTGCTTCACTTCCAAGCAAGCAACATTTCTTGGAAAATTGTTTGAAGTTTGATAGCAGAGAAGGTGACTATGAGGAGCTTCTAGAGGCACTAAAAGATGATGAGGTTACTACTATTGGATTGTATGGCATGGGAGGTTGTGGTAAAACCACCATGGCTATGGAACTTATGAGGACTGCAGAAGCTGAGAATCTATTTGATAAGGTGCTTTTTGTGTCTGTGTCTAATATAGTAGATGTCAGGAAGATTCAAGATAGAATTGCCAGTGCTTTGCAGTTTCAGTTTCCAGAAGGAGGAGAATCGGAGAGAGCACAGCGCTTGCGCGCGAGATTGAATCTTGATGACCAGAGAACTCTTGTCATTCTAGATGATTTATGGCAATCACTTGATTTTGGTGTTATAGGAATTCCATCAGGTCAAAACCATAGAAACTGCAAGGTTCTCATCACTACACAATATGAAACAGTTTGTAGTCTGATGAATTGTCAAAGAATGATTTACTTATCAACCTTAACTGATGAAGAAGCGTGGGAGCTTTTCCAGAATCAAGCACAACTATCCGGAAGCACTTCGGATAACTTGAAGCATCTGGGAAGACTGATTTCAGATGAATGCAAAGGATTGCCTGTTGCTATTGCTGCTCTGGCTAGCACTTTGAAAGGCAAGGCTGAAGATGATTGGAATGTTGCATTGGTTAGATTGAGGAATTCAATTCCGGTGAATATTGAGAGAGGTCTGAAAGATCCTTATAAATGCTTCAGAGTAAGCTATGACAACTTGGATACCAAAGAAGCCAAGTCACTTTTCTTGTTGTGTTCTGTGTTCCCTGAAGGTTATGAAATCCCAGTTGAAACTCTAATCAGATTTGCAATAGGACTTGGCATGGTTGGAGAAGTTTGGTCATATGAGGAGGCAAGGAGTGAAGTATGTGCAGCTAAGAACAAACTCATAAGTTCTTGTTTGCTATCAGATATTGGAGGAGGAAAGCGTGTCAAGATGCATGATTTGGTTCGCGATGTAGCCCTTTGCATTGCAAGCAATGACAACAAGGTGATCAAGTGTGTGTTAGAAAAGAGTGCAATTTTGGAATCCAGATCAATAAGGTATCTGTTGTGTAAGGAGTTTCCAAGTGAACTAAACTGTTCAAGTATTGAACTTCTATGCTTAGAAACAAATTCAGAAGTATCAGATGAAATGTTCAGAACAATGGGAAGGCTTCAAGTTTTGTTTCTTAGCTGCAAAGGCCTTGGTACTAGCTCATTATCAACCATGTCGTTTAAGTGGTTGATAAACCTTCGTTGTTTATGGCTGAAGATGTGGAAACTAGGTGACATCTCTTCCATGGGATATATGACAAAGCTCGAAAGCCTTACGCTGCTTGGTTGTTCATTCTTGGAGTTAACTGAAGATGTAATGGCACAACTAACAAAATTGAGGCTGCTACATTTGTCAGAATGCAAAATGGAGAGAAATCCTTTTCAAGTAATCGGAAGAAGGCCATCGTTGGAAGAACTTTACATTGATGGTGAGACATCTAAATGGGACAATGGTAATGGAGGCCAAACTGAATTCTTCAGAAATTTTAGAGTCCCTCAAGCATTGGCAAGGTACCATATACAACTAGGACACAAATTTAAGGGCCATGGAGATAAAATCCTTAGCTGTCGTAGAACCTTAATTCTTAGCTGTTTTGATACATCAAATGCATCAGCTGTGGCTTTGGCAGAGAAAGCAGAGGTTCTACTTCTAGCAAATATTGTTGGAGGTGCACAAAATATCACACCTGATATATTCCAAATTGAAAGAGAAGGATTTATGGATTATGGCTGTATTCAGCTTTGGTTATGTGATTCTGATGAGATCAAGTGTTTGGTTGAAAACAGCAATCATCCCCAACAAAGGCTGAGAAATATGTTCTCCAGGTTGCGGCAACTAAGACTCGAAAGAATGAAGAAGTTTGGAGCTTTATACCATGGTGTGCCTCCTAGTGGCCTTTTTGAGAAGCTAGAGCATCTATATATAAGCAAATGTCCACTGAAAACACGTCTCTTCACACCTGCGATTGCTCGAGGTCTGCAACAGTTGGAAAAGCTAGAGATATTTTCATGTGATGAACTGAAGCATATACTTGAAGATGAGGAGATAAGTGGACAGGATCATAGGGTGATCTTCTCAAAATTGAAAAAACTTCATATTATGGGGTGCCAAATGCTAGAATATGTAATCCCAGTTACTTTTTCTCAAGGCCTTGTGCAATTGGAGTCTTTGGATATAGATTATTGTGGTGAGTTGAAATATGTGTTTGGAGAATGCAGCACAGATGGTGATACAAGTCATCAAAATGGAATCAACATTGAGTTTCCTGCGCTTCAGGTGCTTCGACTTACTGATAATTGGAACATGATTGGCATTTTCCCCCAGTGTTACAGAGCAGCATGGCCATCTCTGCATAAGTTTTATTTGGAATATTGTCCAAAGCTTAAGATAATGTCCATCAATACTTTCAAGGCTAATGAATGCAAGGACACAGTGGCCATTGAGAAGGACTTCCTCTCTTGGGAAACCATATGTATACACAAGTCCAAAGTAGAAACTATTTTTAGCCTCGAACAGGCCGAGATCATTGAGAAACCGGTGAGATTACAGTTAAGACATCTAGAACTTTCGCATCTACGTCAGATGAAGTATATTTGTGTAGGATTGAAAAACTTTTTTGTCTTCCAAAATCTTAAGACATTAGAGATCAAAAGATGTGAAAAGTTGGAGGTAACCTTTCCTGCTTCTGTTATGAGATGCCTTCCGGAATTGAAGCATCTAAAGATTATAAAATGCCGGGAACTGAAGTTGATCATTGAAGAGGGTGATGCAGAGAATCACAGATTATCAAATTGTGTTCCTCCACAGCCATGCTTCCCAAAGCTGTCTGAACTGATTATCACAGACTGCCAGAACTTGGAAAGTTTATTCCTTGTCTCCGAATCGAATGACCTTCCCAATCTAGAAGTTCTCATCATAGTTGGAGCTGGTAAGCTAAAAGAATTGATCAGATGTGAAGAAAGACAAAGTGATCAAATAAGAAACGTGCAAGTTAAGCTTCCAAAGCTTAAACTTCTAATGCTGATGTCCATGTCTAATCTTTGCCAAGAAATTGAACTGCCCTCTGCAGCACTTTGTGTCATCGATGAATGTCCAAAATTCCCTCTGACTTCATCGGTTGCTACCTTCAAGGAGTTTGAACGAAAAATCTCTGAATTGGATATAGATCTGGAGGATCTGGAAATAGCTGGAATTGACCAATGGAAAGTACTCGACAGGGTTCGCGAGATTAATAAATCGGATCAGATTGAAGAAGAAGAAGCAGAGATCAAAATTGTTGGAAAATCTTCTTATTTTGATATACCATCTACATCTACAAGTCCCTTGGACATTGCTGTACATAAAGCACACTCACATAGTATTGAAGGAATAGAGAAAACCTGTGTTGGAGAAGTTCCAGCATCACTGAAGCCAATATCACCAATTTTTGGTTCAGAAGTAGTAGCAAAACCTCTATATAAAATACCCTCTATTAATGTTGAGGACAAGATTAAAGAAGGCCAAAAAATGCAGGATGTTAAAGATAGTATCCAAGAGCAAGAGCAACCTCACTTATCAGATAAGCAAGTTGTCTCTAATAGCAATATTGAGGTTCATGGAGATTCGTCGATGATAACGAAATTGGAAGCATTTAAGCAGTGTTCTGATCTTGATGATGCACAAATTGCACTGCTTGCTGAGGCAATAGCTGTGTATCCTCATCTTTGGAAAGTTGTTGAGGATTTCAGCATGCGCTTTCAAGCTTGGATGTTGAAGACTTTGGTAGATATATTATTCTTCCTTCGGAACGAATCTCCGGCCAGTGTTACTCCTCAACGGAAGAAGGACTTCCAGAAACTCTGTGATGAAGCTATTCAGTTGGGATTTGACAAGTCATGGATTCATGAAATGCATCAACGTGTTATGGTTATGGTTAAGGATACTAATAAGGTGGATCATGCACAAGAACAACTTGGTGAGCTTCTTAAGAAGCATGATCATCTAACTGAGCAACTTCAAAGCATTAAGGCTGAAATTGTTAGTCTCAGAGACTTTGTTGCTTCTCACAAAAGATGTTTTGATTTTCTTTGA 4575 0.3904 MMDCISGFASSISRDLVVGTTNQLRYPCCFNDFIEDLEQEEEKLITTRNSVEDRVKHARKQVIKNAEVVNAWLEKSNPLKDKAEDLIRKARTNRSCCFGYCPNWIWKYHLAKKLAKRRKEVEMCVQEGKMYIQYERIASLPSKQHFLENCLKFDSREGDYEELLEALKDDEVTTIGLYGMGGCGKTTMAMELMRTAEAENLFDKVLFVSVSNIVDVRKIQDRIASALQFQFPEGGESERAQRLRARLNLDDQRTLVILDDLWQSLDFGVIGIPSGQNHRNCKVLITTQYETVCSLMNCQRMIYLSTLTDEEAWELFQNQAQLSGSTSDNLKHLGRLISDECKGLPVAIAALASTLKGKAEDDWNVALVRLRNSIPVNIERGLKDPYKCFRVSYDNLDTKEAKSLFLLCSVFPEGYEIPVETLIRFAIGLGMVGEVWSYEEARSEVCAAKNKLISSCLLSDIGGGKRVKMHDLVRDVALCIASNDNKVIKCVLEKSAILESRSIRYLLCKEFPSELNCSSIELLCLETNSEVSDEMFRTMGRLQVLFLSCKGLGTSSLSTMSFKWLINLRCLWLKMWKLGDISSMGYMTKLESLTLLGCSFLELTEDVMAQLTKLRLLHLSECKMERNPFQVIGRRPSLEELYIDGETSKWDNGNGGQTEFFRNFRVPQALARYHIQLGHKFKGHGDKILSCRRTLILSCFDTSNASAVALAEKAEVLLLANIVGGAQNITPDIFQIEREGFMDYGCIQLWLCDSDEIKCLVENSNHPQQRLRNMFSRLRQLRLERMKKFGALYHGVPPSGLFEKLEHLYISKCPLKTRLFTPAIARGLQQLEKLEIFSCDELKHILEDEEISGQDHRVIFSKLKKLHIMGCQMLEYVIPVTFSQGLVQLESLDIDYCGELKYVFGECSTDGDTSHQNGINIEFPALQVLRLTDNWNMIGIFPQCYRAAWPSLHKFYLEYCPKLKIMSINTFKANECKDTVAIEKDFLSWETICIHKSKVETIFSLEQAEIIEKPVRLQLRHLELSHLRQMKYICVGLKNFFVFQNLKTLEIKRCEKLEVTFPASVMRCLPELKHLKIIKCRELKLIIEEGDAENHRLSNCVPPQPCFPKLSELIITDCQNLESLFLVSESNDLPNLEVLIIVGAGKLKELIRCEERQSDQIRNVQVKLPKLKLLMLMSMSNLCQEIELPSAALCVIDECPKFPLTSSVATFKEFERKISELDIDLEDLEIAGIDQWKVLDRVREINKSDQIEEEEAEIKIVGKSSYFDIPSTSTSPLDIAVHKAHSHSIEGIEKTCVGEVPASLKPISPIFGSEVVAKPLYKIPSINVEDKIKEGQKMQDVKDSIQEQEQPHLSDKQVVSNSNIEVHGDSSMITKLEAFKQCSDLDDAQIALLAEAIAVYPHLWKVVEDFSMRFQAWMLKTLVDILFFLRNESPASVTPQRKKDFQKLCDEAIQLGFDKSWIHEMHQRVMVMVKDTNKVDHAQEQLGELLKKHDHLTEQLQSIKAEIVSLRDFVASHKRCFDFL* 1525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0180 1524 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 24 966 - -
Amo07g0180 1524 PANTHER - 1002 1148 - -
Amo07g0180 1524 Gene3D - 141 304 IPR027417 -
Amo07g0180 1524 SUPERFAMILY L domain-like 468 968 - -
Amo07g0180 1524 CDD AAA 156 289 - -
Amo07g0180 1524 PANTHER NB-ARC DOMAIN DISEASE RESISTANCE PROTEIN 1002 1148 - -
Amo07g0180 1524 Coils Coil 1479 1506 - -
Amo07g0180 1524 Gene3D Ribonuclease Inhibitor 987 1203 IPR032675 -
Amo07g0180 1524 Gene3D - 393 478 IPR036388 -
Amo07g0180 1524 PRINTS Disease resistance protein signature 341 355 - -
Amo07g0180 1524 PRINTS Disease resistance protein signature 609 625 - -
Amo07g0180 1524 PRINTS Disease resistance protein signature 174 189 - -
Amo07g0180 1524 PRINTS Disease resistance protein signature 248 262 - -
Amo07g0180 1524 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 408 IPR027417 -
Amo07g0180 1524 SUPERFAMILY RNI-like 1018 1184 - -
Amo07g0180 1524 SMART AAA_5 171 326 IPR003593 -
Amo07g0180 1524 Pfam NB-ARC domain 157 387 IPR002182 GO:0043531
Amo07g0180 1524 PANTHER - 24 966 - -
Amo07g0180 1524 Coils Coil 34 54 - -
Amo07g0180 1524 Gene3D - 306 392 IPR042197 -
Amo07g0180 1524 Gene3D Ribonuclease Inhibitor 486 972 IPR032675 -
Amo07g0180 1524 Coils Coil 1211 1231 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0180 Amo-Chr7 1740669 1746304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0180 156 507 WRKY Transcription Factor Family AT5G45050 25.876 1.65e-13 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0180 - - adu:107496081 2837.75