Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0177 ATGTCTGGTGATGATGATGTTGTTGTTGGTGCCAACATTAATAATCTTGGTGCTAGCTTACTCATAACTAGCAGCAGGTACATCAAGATTTGGCATAGAACCACCAAATACATTGGAATTCTCATTTATCTCAAGAAATCAACACCATACACTGCATTGCCTCCTGCTAGATCCAAATCATACCATGAAATTGAGATTGCCTCTGATGATGATCAAGAGGAGAAAGTAGAGCATGATGGCCCTCTTTGTTCACCACTTTCTGATCAACACACTGAGGAGGGCCTTATTGGCAATGGGAACTATAAGGTGTTGCCAGGGCATGATGGAACAAGCTTCACCAAGTGTTTGTGGAATTGCTTCAAACGCAACAATTATGCAATTTCAGTGCTGTTATGCTCAGCTGGTTTGTCCTTTGCCACAGAGTTCAAGCAGGAGGGACCTAAATATGGTTGGCATGATGGTGTTGCCATAGTAATTGCTGTTATCCTGATTGTTGCATTCCCTTCCATAACAAACTATTGGAGCGAAAGGAAGATGATGAAACTGTCAAAGAGAAAGGAGAAAATGATATTCACAGTTGAAAGGGAGGGCTTGTTGGAGAGGCGAATCGAGAAACCAATCTGTTACATTGACAAATTTGTTCTTTTGGTCTCAGTATCCGTTGCTCTTGTGGTGCTTATTCGCCTGATCTGCAAATCGAATGGGGACAGTGGTGATTTGCCAGAGCTTAAGGGGAATGTCTCAGTTGGTTTGGTGATGGAAGTTCTTCAGAGAACCTTTTTGAGGCCATATGGAAGGATTTCCATCTTAGCAGGTCTTGTTACTGTTGTAGTACTATGTGTGCAACATGGAGTGCCACTTATGGTTACAGTTTCTCTCTATTACCAGAAGGTAGTGTCCAGAAAAGATGCAGTCATAAATGGTTTATCAGCTTGTACAACAATGGGGCTAGTTACTGTCATCTGCATTGATGTATCTGGTGGATTGACATCCGAGCTGATGAAGGTTAGCAGAGTTTGGATGGGGGAGAAAGATATTAGCAAGGTTGAGGAATCAGAAGTTAATCAAGTTGTTCTCAGTATGCTTCAACAAGGAGTTGTTTTATCTGTGGCACCAGAGCTTCAGCTTTCTCCAATATCAAGTTCACTTATTTCATGGGCTGAAACAACATCGGGAATGAATAGAGAGTATTTTACAACAAAATTTGACACTCTAAAGCACAGAAAACTGGATTCTGACAAAGAAGGCAGTGGAGTTTTGTTGAAAAATGTTGGGGAGAATGATCAAAATCTGCACTTGCACTGGAGCGGTGATGCATCCACGGTATTGGATATGTGTTCACTATACTATGATAGCAAAGGGGAATGTCACACCATAGGGAATCAGAAAATCAAATTTGAAGAAGTGATTAAGGAGATGGAAAATAGTGGTCTGAAGCCAATTGCATTTGCTCATAAACAAACTACGGTGCAAGAACTTGAACAAGATGAATTGATATTGTTAGGATTGATGGGTCTCGAAGGAACATGTCAAGAATCCAGAAAACTAGCAATGGAAGAGCTCAGAGAAGCTGGATTAAAGATCATACTGGTCTCAGAGGATGCAATTCTGGTAGTGAATGACATAGCTCAGGAACTAGGATTTGAATTGACAGTAGATGACATTTTCCTTGAAGGAAAAGTACTTCAAGATTTGAATGGAAGTGCTAGATTGGATAAGGTGGACCTGGCCCTTATAATGGGAAGTTTTTGCCTTGAAGACAAGATTCTCATGGTACAGTGCTTTCAAGAAAAGGGTCATGTGGTTGCATTTGTTGGAAAAGGGACAAGTAGCCATAGTTCAGTTCTGCAAGTAGCTGATGTAGGCATAATCCATGATTCTCTAGGCACAGTAGTGGACACAGATAGTTCTGGAATAACCATCAGATGTTTCAATGCATTGAAACCAATTGTTATGGCTGGTAGAAATAACTACAGAAACATTCAGAAGTTCATTCAACTTCAACTCACCTTTAGCATATCAGGTTCACTCATAACCTTGATTACTACAATCTCCACAGGAGAATCACCCTTAACAGCATTCCAATTTGTTTGGGTGAATTTTGTAATGTGCCTTCTTGGTGGCCTAATGATGATAATGGAGTTGAGTTGTGAGGAAAAGCTTCTTGCTATTCAATCATCAAGAAGGAGTCAATCAGTTATAACAAGAGAGATCTTGAAGAGCATAGCTGTTCAGGTTTTGTACCAGACTTGGGTATCGATGATGCTCAAATTCAGTGGCCATAGAACTAATGAAGAGAAAGAAGTTAGGAAAACCATGATCTTCAACTCATTCCTATTTTGCCAGGTCTTCAATCTACTCAACACCATGAATTTGTTGAAAAAGCAAGTTGTCAAAGTTGTTCTGAAAAGCTACTTTTTCTTGGTGGCTTTAGCTTTTTGCATTCTTGTGCAGGTGCTGATGATTGAGTATGCAAAATGCCTAGCATATTGCATGAGGCTGAATGTTCCACACTGGGCTATCTGTGTCCTTGTTGGTTTCTCTTCATGTGCATTTGAATGGATCCTGAAGAATCTAGTAGTGATTCTTAGCACCAATAATGCTTCAGAAACAAGTACTTCTCCCTCTGTATTGTTTAATTGGTCACGTTGGTTTTATCTCCCTTTGGGATTTCCGTTTCTGATGTTGCTTTTCTTCCCTGACCAAATGAAACAGATACTTAGATAG 2727 0.4019 MSGDDDVVVGANINNLGASLLITSSRYIKIWHRTTKYIGILIYLKKSTPYTALPPARSKSYHEIEIASDDDQEEKVEHDGPLCSPLSDQHTEEGLIGNGNYKVLPGHDGTSFTKCLWNCFKRNNYAISVLLCSAGLSFATEFKQEGPKYGWHDGVAIVIAVILIVAFPSITNYWSERKMMKLSKRKEKMIFTVEREGLLERRIEKPICYIDKFVLLVSVSVALVVLIRLICKSNGDSGDLPELKGNVSVGLVMEVLQRTFLRPYGRISILAGLVTVVVLCVQHGVPLMVTVSLYYQKVVSRKDAVINGLSACTTMGLVTVICIDVSGGLTSELMKVSRVWMGEKDISKVEESEVNQVVLSMLQQGVVLSVAPELQLSPISSSLISWAETTSGMNREYFTTKFDTLKHRKLDSDKEGSGVLLKNVGENDQNLHLHWSGDASTVLDMCSLYYDSKGECHTIGNQKIKFEEVIKEMENSGLKPIAFAHKQTTVQELEQDELILLGLMGLEGTCQESRKLAMEELREAGLKIILVSEDAILVVNDIAQELGFELTVDDIFLEGKVLQDLNGSARLDKVDLALIMGSFCLEDKILMVQCFQEKGHVVAFVGKGTSSHSSVLQVADVGIIHDSLGTVVDTDSSGITIRCFNALKPIVMAGRNNYRNIQKFIQLQLTFSISGSLITLITTISTGESPLTAFQFVWVNFVMCLLGGLMMIMELSCEEKLLAIQSSRRSQSVITREILKSIAVQVLYQTWVSMMLKFSGHRTNEEKEVRKTMIFNSFLFCQVFNLLNTMNLLKKQVVKVVLKSYFFLVALAFCILVQVLMIEYAKCLAYCMRLNVPHWAICVLVGFSSCAFEWILKNLVVILSTNNASETSTSPSVLFNWSRWFYLPLGFPFLMLLFFPDQMKQILR* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0177 908 SUPERFAMILY HAD-like 320 707 IPR036412 -
Amo07g0177 908 PANTHER CATION TRANSPORTING ATPASE 193 875 - -
Amo07g0177 908 PANTHER CATION TRANSPORTING ATPASE 108 187 - -
Amo07g0177 908 Gene3D - 503 646 IPR023214 -
Amo07g0177 908 PANTHER CATION-TRANSPORTING ATPASE PLANT 193 875 - -
Amo07g0177 908 PANTHER CATION-TRANSPORTING ATPASE PLANT 108 187 - -
Amo07g0177 908 Gene3D - 337 502 IPR023299 GO:0000166
Amo07g0177 908 SUPERFAMILY Calcium ATPase, transmembrane domain M 104 861 IPR023298 -
Amo07g0177 908 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 329 506 IPR023299 GO:0000166
Amo07g0177 908 Gene3D - 122 336 - -
Amo07g0177 908 Gene3D - 647 861 - -
Amo07g0177 908 Pfam Cation transporting ATPase, C-terminus 689 857 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0177 Amo-Chr7 1717887 1721206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0177 283 883 Primary Pumps ATPases AT3G63380 35.726 3.66e-104 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0177 K01537 - gmx:102661547 730.709