Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0176 ATGGCCACCTCTGCCATCCAGCAATCTGCATTCACCGGCCAAACTGCCTTGAAGCAAGGAAATGAACTTCTCCGCAAGATTGGTGGCGCCGGCAAAGGCCGCATTAACATGCGTCGTACCGTGAAGAGTACCCCTCAAAGCATTTGGTATGGACCTGACCGTCCCAAGTACTTGGGTCCATTCTCCGACCAAATCCCCTCATACTTGACCGGAGAATTCCCCGGTGACTACGGATGGGACACTGCCGGATTATCTGCAGACCCAGAGACCTTTGCAAGGAACCGTGAGCTGGAAGTGATTCACAGCAGATGGGCCATGCTTGGTGCACTTGGATGCACATTCCCAGAAATCCTTGAAAAGAATGGTGTCAAGTTTGGTGAGGCTGTTTGGTTCAAGGCTGGAGCACAGATCTTCTCAGAGGGTGGCCTTGACTACTTGGGGAACCCGAATTTGATCCATGCTCAGAGCATTCTTGCAATCTGGGCTGTCCAGGTTGTGCTCATGGGATTTGTTGAAGGCTACAGAGTTGGTGGAGGGCCTCTTGGTGAAGGACTAGACCCAATTTACCCTGGTGGTGCCTTTGATCCTCTTGGTTTGGCCGATGACCCCGAAGCATTCGCCGAGTTGAAGGTGAAGGAACTCAAGAATGGCCGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTTCAGGCCATTGTTACTGGCAAGGGACCTATTCAGAACCTGTTTGACCATGTTGCTGACCCTGTTGCCAACAATGCTTGGGCTTATGCCACTAACTTTGTCCCTGGACAATAA 798 0.5125 MATSAIQQSAFTGQTALKQGNELLRKIGGAGKGRINMRRTVKSTPQSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPEILEKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLFDHVADPVANNAWAYATNFVPGQ* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0176 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Amo07g0176 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
Amo07g0176 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Amo07g0176 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 265 IPR001344 GO:0009765|GO:0016020
Amo07g0176 265 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0176 Amo-Chr7 1715736 1717586 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0176 1 265 Chloroplast and Mitochondria Gene Families AT2G05070 88.302 1.54e-180 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0176 K08913 - gmx:100815789 531.176