Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0160 ATGATCARCTATCCTGTTGCTGTTACTGTTACACCATTTATGAATCGTTTCTCGAATTTCTCAATRCTTTCCTTCTGGAACTCCAATATAAGAGAAGCTGTGAATGGAGGCCATGCACAAAAAGCCCTACTTCTTTTCCGCCAAATGAAGCAAACTGGYGTTACACCCAACGGTTCTACCTTTCCRTTTGTTGCAAAAGCCTGTGCCAGAATTTCCTGTCTCTGGAACTCCCAAATYATCCATGCKCATYTTGCCAAATCCTGCTTTCAGTSCAATGTTTTTGTGCAAACCGCAATGGTTGATATGTACATGAAATGTGGTCATTTGGAAGATGCACACCATGTGTTTGTTGGAATGCCCACTAGGGATATTGCTTCTTGGAATGCAATGCTTGCAGGTTTTTCTCACAGGAGTTTTGTTGACAGGTTTTTCTGTCTACTGCGTGAGATGAGGTATAGTGGGATTCATCCTGATTCAGTCACTGTCTTGTTCTTGATTCAGTCTGTTTTGGAATTGAAAAACCCAAATGTTGTGAAGGCAGTGCATTGTTTTGCGATTCGAATTGGAGTTCATATCGATGTTTCTGTGGCTAACACTTTGATTGCTGTGTATGCTAAATGTGGTGACTTGTGCTCAGCAGAGATAGTATTTGATGAAATTGGCAGTGATATTAGGTCTGTCATCTCATGGAATTCTATGATTGCAGCATATGCAAATTTTGAAAAGTATGACAAGGCTGTTTATTGTTACACAGGGATGCTTGGTTGTGGGCTTTTGCCTGATATTAGTACAATCCTCAATTTGCTTTCAGCATGTGTGCAACCCAAAGCACTATTTCAAGGTCTGATAATTCATTCTCATGCAATTCAGTTAGGTTGTGATGCTGATTTGTGTGTGCTGAATACTCTTATTTCTATGTATTCTAAGTGTGGGGATGTTCATTCTGCAAGATTATTGTTTGATGGCATGTCTATCAGAACTTGTGTTTCATGGACTGGAATGATTAGTGGGTATGCGGAGAAAGGATATATGGATGAGGCATTAACCTTGTTTAATACAATGGAAGCAACAGGTGAAAATCCAGATTTAGTTACTGTGCTTGCTTTGATTTCAGGTTGTGGTCAAACAGGATCTCTTGAACTTGGAAAATGGATTGATAATTACTCTATTAACAAAGGGTTGAAAGAAAATATTGTAGTTTGTAATGCACTAATTGACATTGGAGATGTTAAGGATGCTTTGGACCTGTTTCTTGTGATGGTGCAGATGGGAATGAAACCAAACCACATAACATTTCTTGCTGTTCTCCAAGATTGTGCTCATGGAGGTTTACTTGAAAGAGGATTGGAGTGCTTCAACATGATGACACAAAAGTATGGTATAAGACCTGGTATAGACCATTATTCATGTATGGTTGATCTCCTTGGTCGTAAGGGACAACTGAGAGAAGCTTTAGGAATTATTGAATGTATGCCGGTTGAACCTGATGCTGGCATACGGAGTGCATTGCTGTCTGCATGCAAACTACATGCTAAGATGGAGATGGGCAAATACGTCTCGGAGCGGCTATTTCAATTGGAACCCAATGTGGCAGTTCCTTACGTGGAGTTGGCTAACATATATGCATCAGCTGGGATGTGGGATGGAGTTGCAGCTATAAGAAGAAAGATGAAATATCTTCAAGTGAGAAAATCAAACTTTTGGCTATTGAAAATGCCTGCTAGTGCTGGGAACTCAAACACCTATGATAGAGAAGGGGAACCGTTTGTTGAAGTTGATCCAACTGGCCGGTTCGGCCGTTACGAAGATCTGCTTGGTTATGGCGCCGTGAAGAAGGTTTATAGGGCCTTTGATCAAGAAGAAGGCATTGAGGTTGCTTGGAATCAAGTTCGACTGCGGAATTTCAGTGATGATCTTGTTTTGATAAACAGGCTTCACTCTGAGGTTGAGTTGCTTAGAAACTTGAGCAACAAGTATATCATTGTTTGTTATAGTGTTTGGAAAGACAATGATCGCCAGAACATCAATTTCATCACTGAGGTTTGCACTTCTGGCAATTTGAGGGAATACCGGAAGAAGCACCGCCATGTTTCCATTAAGGCGTTGAAGAAGTGGTCGAAACAAGTCCTTGAAGGGCTGGAGTATCTTCATACTCATGATCCCTGCATTATACACAGAGATCTCAATTGTAGCAACATCTTTGTCAATGGGAACATTGGACAGGTGAAAATTGGTGATCTAGGATTGGCGGCGATAGTGGGGCGGAGCCATGCAGCGCATTCAATTTTAGGGACACCAGAGTATATGGCACCGGAGCTGTATGAGGAAGATTACACTGAGATGGTGGACATATACTCTTTTGGGTTGTGTGTGCTTGAGATGGTTACAATGGAGATACCCTATTGTGAATGTGACAGTGTAGCCAAGATTTACAAAAAGGTTACAATGGGAATTAAGCCTCAATCCTTGAACAAAGTCACAGACCCAGAGATGAAGGCATTCATTGAAAAGTGCATAGCACAGCCAAGGGCAAGGCCTTCAGCCACTGATCTCCTTAAGGACCCTTTCTTTTCTGAACTCAACAATGATGAAGAATAA 2598 0.4111 MIXYPVAVTVTPFMNRFSNFSXLSFWNSNIREAVNGGHAQKALLLFRQMKQTGVTPNGSTFPFVAKACARISCLWNSQIIHAHXAKSCFQXNVFVQTAMVDMYMKCGHLEDAHHVFVGMPTRDIASWNAMLAGFSHRSFVDRFFCLLREMRYSGIHPDSVTVLFLIQSVLELKNPNVVKAVHCFAIRIGVHIDVSVANTLIAVYAKCGDLCSAEIVFDEIGSDIRSVISWNSMIAAYANFEKYDKAVYCYTGMLGCGLLPDISTILNLLSACVQPKALFQGLIIHSHAIQLGCDADLCVLNTLISMYSKCGDVHSARLLFDGMSIRTCVSWTGMISGYAEKGYMDEALTLFNTMEATGENPDLVTVLALISGCGQTGSLELGKWIDNYSINKGLKENIVVCNALIDIGDVKDALDLFLVMVQMGMKPNHITFLAVLQDCAHGGLLERGLECFNMMTQKYGIRPGIDHYSCMVDLLGRKGQLREALGIIECMPVEPDAGIRSALLSACKLHAKMEMGKYVSERLFQLEPNVAVPYVELANIYASAGMWDGVAAIRRKMKYLQVRKSNFWLLKMPASAGNSNTYDREGEPFVEVDPTGRFGRYEDLLGYGAVKKVYRAFDQEEGIEVAWNQVRLRNFSDDLVLINRLHSEVELLRNLSNKYIIVCYSVWKDNDRQNINFITEVCTSGNLREYRKKHRHVSIKALKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRSHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGLCVLEMVTMEIPYCECDSVAKIYKKVTMGIKPQSLNKVTDPEMKAFIEKCIAQPRARPSATDLLKDPFFSELNNDEE* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0160 865 CDD STKc_WNK 597 857 - -
Amo07g0160 865 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 408 565 - -
Amo07g0160 865 Pfam Pentatricopeptide repeat domain 391 439 IPR002885 -
Amo07g0160 865 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 123 157 IPR002885 -
Amo07g0160 865 Gene3D Tetratricopeptide repeat domain 77 174 IPR011990 GO:0005515
Amo07g0160 865 Gene3D Tetratricopeptide repeat domain 175 277 IPR011990 GO:0005515
Amo07g0160 865 Gene3D Phosphorylase Kinase; domain 1 586 680 - -
Amo07g0160 865 SUPERFAMILY Protein kinase-like (PK-like) 592 857 IPR011009 -
Amo07g0160 865 Gene3D Tetratricopeptide repeat domain 278 387 IPR011990 GO:0005515
Amo07g0160 865 Gene3D Tetratricopeptide repeat domain 388 585 IPR011990 GO:0005515
Amo07g0160 865 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 17 407 - -
Amo07g0160 865 Pfam PPR repeat family 329 373 IPR002885 -
Amo07g0160 865 Pfam E motif 510 564 IPR046848 -
Amo07g0160 865 PANTHER OS07G0578800 PROTEIN-RELATED 408 565 IPR045215 GO:0003723|GO:0009451
Amo07g0160 865 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 226 260 IPR002885 -
Amo07g0160 865 TIGRFAM PPR: pentatricopeptide repeat domain 299 325 IPR002885 -
Amo07g0160 865 TIGRFAM PPR: pentatricopeptide repeat domain 228 262 IPR002885 -
Amo07g0160 865 TIGRFAM PPR: pentatricopeptide repeat domain 329 362 IPR002885 -
Amo07g0160 865 Pfam Protein kinase domain 603 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0160 865 Pfam PPR repeat 97 123 IPR002885 -
Amo07g0160 865 Pfam PPR repeat 126 155 IPR002885 -
Amo07g0160 865 Pfam PPR repeat 467 492 IPR002885 -
Amo07g0160 865 Pfam PPR repeat 228 258 IPR002885 -
Amo07g0160 865 Pfam PPR repeat 300 323 IPR002885 -
Amo07g0160 865 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 22 56 IPR002885 -
Amo07g0160 865 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 327 361 IPR002885 -
Amo07g0160 865 PANTHER OS07G0578800 PROTEIN-RELATED 17 407 IPR045215 GO:0003723|GO:0009451
Amo07g0160 865 ProSiteProfiles Protein kinase domain profile. 599 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0160 865 Gene3D Transferase(Phosphotransferase) domain 1 682 862 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0160 Amo-Chr7 1526578 1531847 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0160 569 857 MAP Kinase Kinase Kinase AT5G55560 75.433 5.17e-163 475
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Amo07g0160 Pkinase 6.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0160 - - adu:107496236 1686.39