Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0143 AAAAATAAAAGGTACTTCCCTTTTAGTTTATCTGATCAAGGAAAAAACCTATACATACATCACAAACAGAGAAAAATGGCATCATCAAGCTCTTACAACTCTCCATGTGCTGCTTGCAAATTCTTGAGGAGGAAGTGTTTGCCAGGATGCATCTTTGCACCTTACTTCCCACCTGAAGAACCCCAAAAATTCGCGAATGTTCACAAGATCTTCGGCGCGAGCAATGTCACCAAGCTTCTCAATGAGCTTCTGCCTCAGCAGAGGGAAGACGCAGTGAATTCCCTCGCATACGAGGCAGAAGCTCGTGTGAGAGACCCTGTTTACGGCTGCGTTGGCGCCATATCTTACCTTCAGAGACAAGTCCAGAGACTTCAGAAGGAACTTGATGCTGCCAACGCGGATCTTCTTCGCTACGCTTGCAACGAAATTCCTCCTCCACATCATCATGTCCCAACCCTAGCACCACCATTAACTCCCACAATTCATCATCAACTTACACAAAGGCACTTTGGTGGTGCAAGAATTGGCAATGATCATGGAATTGGATTTTATAGGCAATCTCCAACCACCTATTCCTTCCCTTATTCTCTTCCATGGAATGAGGACATCAATGGTGGAGGAGCAGAAGGAGGAGGTAATTTATGA 645 0.4527 KNKRYFPFSLSDQGKNLYIHHKQRKMASSSSYNSPCAACKFLRRKCLPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPQQREDAVNSLAYEAEARVRDPVYGCVGAISYLQRQVQRLQKELDAANADLLRYACNEIPPPHHHVPTLAPPLTPTIHHQLTQRHFGGARIGNDHGIGFYRQSPTTYSFPYSLPWNEDINGGGAEGGGNL* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0143 214 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 26 210 - -
Amo07g0143 214 PANTHER ELONGATED PETIOLULE 1 26 210 - -
Amo07g0143 214 Coils Coil 114 141 - -
Amo07g0143 214 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
Amo07g0143 214 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0143 Amo-Chr7 1386242 1388218 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0143 26 139 AS2 family AT5G63090 93.043 1.01e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Amo07g0143 LOB 5.2e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0143 - - gmx:100799774 280.411