Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0136 ATGGGTTGCTGCCAGTCATCGTTGATGCTGAGAGTGAGAGAGGGAGGAGACACTCACCCTCACCCTGACAAGAAGGAGAAGGAGAAAGAGAAGGAGAAGGAAAACCACAAGGATCAGGCCCCCTACCTCCGCAACCACCAGAAGGAGTCCCTCGCAGTCGCAGTCCCAGCCACAGTGGCACCCGCTGCTCCTGACAGCTGGTGGCTCTCCTTCTCGGAGTTCTCGCTGGCGGAGCTGAAGGCCGCCACCGACAATTTCAGCTCCGAATTCATAGTGTCGGAGAGCGGGGACAAGCCCCCTAACCTCGTTTACAAGGGGCGCCTCCGCGACCACTGGATTGCCGTCAAGAAGTTCCCGAAGGCCGCCTGGCCCGATCCCAAGCAGTTCGTGGAAGAGGCCTCCGGCGTCGGCAACCTCCGGCACCCCCGCCTGGCCAATCTCATCGGCTACTGCTGCGACGCTGACCACCGCCTTCTCGTGGCCCAGTACATGCCCAACGACACCCTGGCAAAGCACCTCTTCCACTGGGAGAATCAGACGATTGAGTGGGCCATGCGCTTGAGAGTCGCCCATTATATCGCCCAAGCTTTGAATTATTGCAGCTCCGAGGGCCGCCCCTTGTACCATGATTTGAATGCTTACCGTGTTCTTTTCGACGAGGAAGGTGATCCCCGTCTCTCCTGTTTTGGTTTGATCAAGAACAGCAGGGATGGAAAAAGTTATAGCACAAATCTTGCTTACACTCCTCCTGAATATTTAAGAAATGGAAGGGTCACCCCTGAAAGTGTCATTTACAGCTTTGGGACCGTTCTTCTAGATCTGCTTAGCGGCAAGCACATCCCTCCAAGTCAAGCACTAGATATGATACAGGGTAAAAACAACATGCTTTTGATGGATTCACATTTGGAGGGGAAGTTTTCTATAGAAGAGGCAAATGTAGTTGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCTAGGGAGCGACCTGATACAAAGGATTTGGTTACAACACTTGCTCCACTGCATACAAAACCTGATGTTCATTCTCACATTATGCTTGGCATTCCAAAACAAGAGGAAGCTCCATCAACCCCACAACGGCCTCTTTCTGCAATGGGAGAAGCTTGTTCTAGAATGGATCTAACTGCAATCCATCAGATCTTGGTTGCGACACACTACAGAGACGATGAGGGAACCAATGAGTTGTCATTCCAAGAGTGGACCCAACAGATGAGAGACATGCTGGAGGCAAGGAAGCGTGGAGACTGTGCATTTCGTGACAAGGATTTTAAGACAGCCATTGATAACTATTCCCAGTTTATTGATGTGGGAACGATGGTCTCCCCAACTGTATTTGCACGGCGCAGTCTGTGCTATCTTTTATGTGATCAGCCAGACCCTGCACTCCGAGATGCAATGCAAGCACAGTGCGTTTATCCAGACTGGCCCACGGCTTTCTATATGCAATCTGTCGCCCTTGCAAAGTTGGACATGCAGAAGGATGCCACGGATATGCTAAATGAGGCTGCTGCATTGGAAGAGAAGAGGCAAAGGGGAGGGAGAGGATCCTAG 1575 0.513 MGCCQSSLMLRVREGGDTHPHPDKKEKEKEKEKENHKDQAPYLRNHQKESLAVAVPATVAPAAPDSWWLSFSEFSLAELKAATDNFSSEFIVSESGDKPPNLVYKGRLRDHWIAVKKFPKAAWPDPKQFVEEASGVGNLRHPRLANLIGYCCDADHRLLVAQYMPNDTLAKHLFHWENQTIEWAMRLRVAHYIAQALNYCSSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLIKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSQALDMIQGKNNMLLMDSHLEGKFSIEEANVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVHSHIMLGIPKQEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDCAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMQKDATDMLNEAAALEEKRQRGGRGS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0136 524 MobiDBLite consensus disorder prediction 1 42 - -
Amo07g0136 524 ProSiteProfiles Protein kinase domain profile. 89 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo07g0136 524 Gene3D Transferase(Phosphotransferase) domain 1 165 356 - -
Amo07g0136 524 Gene3D Phosphorylase Kinase; domain 1 65 163 - -
Amo07g0136 524 Gene3D Tetratricopeptide repeat domain 413 521 IPR011990 GO:0005515
Amo07g0136 524 SUPERFAMILY Protein kinase-like (PK-like) 68 344 IPR011009 -
Amo07g0136 524 Pfam Protein tyrosine and serine/threonine kinase 108 339 IPR001245 GO:0004672|GO:0006468
Amo07g0136 524 Coils Coil 496 516 - -
Amo07g0136 524 MobiDBLite consensus disorder prediction 14 42 - -
Amo07g0136 524 SUPERFAMILY TPR-like 416 517 IPR011990 GO:0005515
Amo07g0136 524 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 522 - -
Amo07g0136 524 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 522 IPR045845 GO:0004672|GO:0009742
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0136 Amo-Chr7 1297214 1302350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0136 74 347 Glycoside Hydrolase AT3G07070 35.762 2.26e-43 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Amo07g0136 PK_Tyr_Ser-Thr 6.5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0136 K14500 - gmx:100808907 892.493