Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo07g0131 ATGTTTGGAAACAAAACTGAAGGGAAAAAAAGGAAGACTGCAGAGGCAGCGCATGGGGTGCGTAAAGTGAAGAAGAAGCAAAGAAAGAAATGTGGAGAGAGCTGGGAGAAGTGGAAGGATCATATTCATAAAGCTCGTAAGTCGCAAGTTGAAGTTGGCGGAGTTACAGGGTTGCAGCCTGAGCTTCAAACTGCCGCTGCTGATTCCTTCTCAGATCATCCTCCTCATCGCCTCCAGACATGTGCTGCAAATGCAAATGAAAAAGGTGACAAGGCCTCCTTGATTCCTCACTCCAGACGGCCTGCACTCCCCTCTCTGCAAATACCCCCATGGTCACTAGATGCCGCATTATCTTCTTTCGCAAAGACGGATGGTCCTTCCCTCTCCAGTCCCATTTCTGCTTCCACATCCACCTCTTCTAGAGGACTTCCGCCAAGGCCGAATTCGGCCAGAGTCAGGCCTTCCATGAGAAGTATAATTCCTCAAGGGAACTTCAGGGCCAGAACTAGTCCCCGCGATGCTGAAAGGACGGTTCTCATGGTTCCTGATACTACCCTGTCAAATGCACTTTTGGATAAGCCTTCTACTTCAAGGACTCTCTCTCTTAGTGGTAAAGGTTCATTCTCTCCATTGTCAAAGGTTGCCCACTCATTACCGGTTACTCCAATTGCATCTTTGGGTCAAGAAAGTGTACACGGCAGACATCTGGGATGTGCTTCTGATTTAAATACAATGGTTGTCAAGCAGCACATAACTCGATCACTTTCGGTTCCAGTTGATGCCAAAGCCACCAAATTGAGGTGCACTCAGTCTAGGGTCTTGATTCGTATCATTTCAGCCAGGCGGCATCTTGCAACTGTTGATGGAACCTCAACTGGTGATGCTTCAGTCATGGAGATTGCTATTGAGGATGCTACAGCAGATATTCCAGAGGAAGAAGCAGTTTGTAGGATTTGTTTGGCAGAGCTCGGGGAAGGAGAAAATACACTTAAGATGGAATGCAGTTGTAAAGGTGATCTTGCGCTTGCTCATCAAGACTGTGCGGTAAAGTGGTTTAGTATTAAGGGCAACAGGACCTGTGATGTCTGCAAGCAGGATGTTCAAAACCTCCCGGTAACACTATTGAAAATTTATGATCGTCAACCCCCTGCCAGACAGCCATCAAATGTGCCACAACCAAGGGAAATAGCTTATTACAGGATCTGGAATGATATACCTGTACTTGTCTTGGTTAGCATGCTTGCTTACTTCTGCTTTTTGGAGCAACTACTGGTTTCAGATTTGGGTCCTCGAGCTCTTGCAATTGCGTTACCTTTCTCCTGTGTTTTGGGTCTCCTAACATCTATGATTGCGTCAACCATGGGTAAAATTTGTTTCCTTCTGTCTGCCAAAGCACAATAA 1401 0.464 MFGNKTEGKKRKTAEAAHGVRKVKKKQRKKCGESWEKWKDHIHKARKSQVEVGGVTGLQPELQTAAADSFSDHPPHRLQTCAANANEKGDKASLIPHSRRPALPSLQIPPWSLDAALSSFAKTDGPSLSSPISASTSTSSRGLPPRPNSARVRPSMRSIIPQGNFRARTSPRDAERTVLMVPDTTLSNALLDKPSTSRTLSLSGKGSFSPLSKVAHSLPVTPIASLGQESVHGRHLGCASDLNTMVVKQHITRSLSVPVDAKATKLRCTQSRVLIRIISARRHLATVDGTSTGDASVMEIAIEDATADIPEEEAVCRICLAELGEGENTLKMECSCKGDLALAHQDCAVKWFSIKGNRTCDVCKQDVQNLPVTLLKIYDRQPPARQPSNVPQPREIAYYRIWNDIPVLVLVSMLAYFCFLEQLLVSDLGPRALAIALPFSCVLGLLTSMIASTMGKICFLLSAKAQ* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo07g0131 466 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 301 371 IPR013083 -
Amo07g0131 466 MobiDBLite consensus disorder prediction 1 36 - -
Amo07g0131 466 CDD RING_CH-C4HC3_MARCH 316 364 - -
Amo07g0131 466 ProSiteProfiles Zinc finger RING-CH-type profile. 308 370 IPR011016 GO:0008270
Amo07g0131 466 SMART ringv_2 315 364 IPR011016 GO:0008270
Amo07g0131 466 SUPERFAMILY RING/U-box 312 367 - -
Amo07g0131 466 MobiDBLite consensus disorder prediction 122 158 - -
Amo07g0131 466 MobiDBLite consensus disorder prediction 122 145 - -
Amo07g0131 466 Pfam RING-variant domain 316 363 IPR011016 GO:0008270
Amo07g0131 466 PANTHER OS02G0165000 PROTEIN 74 458 - -
Amo07g0131 466 PANTHER OS02G0165000 PROTEIN 74 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo07g0131 Amo-Chr7 1259522 1262866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo07g0131 299 370 C3H Transcription Factor Family AT2G37950 46.575 1.35e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo07g0131 - - ahf:112765571 849.736